Gene DET1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1580 
Symbol 
ID3229129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp1421678 
End bp1422265 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content48% 
IMG OID637121138 
ProductTetR family transcriptional regulator 
Protein accessionYP_182277 
Protein GI57233666 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000739015 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGAT TTGAAAAACG CAAGACCCAG AGTAAAGAAG CTATTTTGAA AGTTGCCCTG 
GAATTATTTG AACAGCATGG TTTCAGCCGT GTTTGCATAC CTGAAATTGC CCGGCAGGCA 
GGCGTTTCAC CGGTGACGGT CTATAATCAC TTCGGAAATA AAGAAGAGCT TATCAAAGAG 
ATATTCAAGG TCTTTCTGGA TAACCTGCTG GATAGCTACC GCAAGATAAT AGAGGCCAAA 
ATGCCGTTTG AGGAAAAGCT GGAGACCTTG TTTTTCAGCC AGGAGGCCTT TACCCAGCAG 
TATCAGGGTG AGCTTATGGA GACCTCCGCG AAGCGTTATC CGGTAGTGCA GGAGTATATT 
GATGATTACT GGGGAGAGCA GCGGGACAAC CTTATCGGCA AGCTTCTGGC TGAAGGGAAA 
GCCGGCGGTT ACATACGGCC AGACCTCAGC CTGCAGGTCT TTTTCTTTTA CTATCAGATA 
GTCAGGCGGG GTGTTTATGC CATACCTAAT ATTGCTGAAA GAATGCTGAA TAAACCCCAT 
CTTATGCCGG AGGTCATCTC GGTGGCTATC CATGGTTTGC GCGGTTAG
 
Protein sequence
MDGFEKRKTQ SKEAILKVAL ELFEQHGFSR VCIPEIARQA GVSPVTVYNH FGNKEELIKE 
IFKVFLDNLL DSYRKIIEAK MPFEEKLETL FFSQEAFTQQ YQGELMETSA KRYPVVQEYI 
DDYWGEQRDN LIGKLLAEGK AGGYIRPDLS LQVFFFYYQI VRRGVYAIPN IAERMLNKPH 
LMPEVISVAI HGLRG