Gene DET1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1456 
Symbol 
ID3229205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp1315300 
End bp1315881 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content51% 
IMG OID637121016 
Product2'-5' RNA ligase family protein 
Protein accessionYP_182159 
Protein GI57233742 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000758334 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGAAG GACTTATCCG CACCTTTATT GCTATAGAAC TGCCGCCGGA GCTAAAAACC 
AGACTCGCCG GTCTCCGGGA TGCATTACCC ATACCCTCAC AAGCTGTCAA ATGGGTAAAC 
CCCGAATCAA TGCATCTGAC TATCAAATTC CTGGGGGATA CCCCTTTAAG CCAAATACCC 
AATATCATAA AGGGGCTGGA GGAAGCCGCA CAGGTCTGCC ACGCCTTTAC CCTATCCACC 
ACCCGCATAG GGACTTTCCC CTCACTTTCA AGCCCCAAGG TAATCTGGCT GGGGCTGCAT 
GGTGAGATAG AAAAACTAAA TACCCTCTTT GCGGAGGTTG AAAAAAATAT TTCAGGGCTG 
GGTTTTCCGG CAGAAAAACG GGATTTTGCT CCCCACCTAA CCCTGGGGCG TCTTAAGGAG 
GTGGCTGCAA AAAGTGACCT GCAAACCGCC GCCGAATCAC TTAAAACCGC ACCCCCCTTT 
CCTAAAACCA GTTTCAAAGC CTCACATATC TGTCTTTTCC AAAGCCAGCT TTTAGCCGCC 
GGGCCGGTAT ACACCAGACT GGCCCAAATC AGCCTCGCCT AG
 
Protein sequence
MTEGLIRTFI AIELPPELKT RLAGLRDALP IPSQAVKWVN PESMHLTIKF LGDTPLSQIP 
NIIKGLEEAA QVCHAFTLST TRIGTFPSLS SPKVIWLGLH GEIEKLNTLF AEVEKNISGL 
GFPAEKRDFA PHLTLGRLKE VAAKSDLQTA AESLKTAPPF PKTSFKASHI CLFQSQLLAA 
GPVYTRLAQI SLA