Gene DET1426 details

Gene Information

• Locus tag: DET1426
• Symbol: gcp
• ID: 3229245
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1296570
• End bp: 1297550
• Gene Length: 981 bp
• Protein Length: 326 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637120986
• Product: putative DNA-binding/iron metalloprotein/AP endonuclease
• Protein accession: YP_182134
• Protein GI: 57233782
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0533] Metal-dependent proteases with possible chaperone activity
• TIGRFAM ID: [TIGR00329] metallohydrolase, glycoprotease/Kae1 family

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000536694
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATAC TCGGTATAGA AAGCTCCTGT GATGAAACCG CTGCCGCAGT AGTGGCAGAC 
GGGGTAAATA TTTTATCCAA CCGGGTATCC TCGCAGATAG ATATCCACTC CCGTTACGGC 
GGGGTAGTCC CCGAAGTGGC TTCCCGCCAG CACCTGCTTT CCATATTACC GGTCATAAGT 
GACGCACTTA AGGAAGCACG TACCGGATTT GATGAAATTT CGGCCATAGC TGTAACCAAC 
GGGCCGGGTC TGGCAGGCTC TCTGATAGTG GGGGTAAATG CCGCCAAAGC CATAGCCGCC 
GCCCGCGGCA TACCCCTGGT GGCGGTAAAC CACCTGCACG GCCATATCTA TGCCAACTGG 
CTTTCCGGCA GGATACCGGA ATTCCCCTGC CTGTGCCTGA CTGTCTCAGG CGGGCATACC 
GACCTGGTGC TGATGAAAGG GCATGGTCAG TATCAGCTGC TGGGACGTAC CCGTGATGAT 
GCCGCCGGAG AAGCCTTTGA CAAAGCCGCC AGAATACTGG GTTTAAGCTA TCCAGGCGGG 
CCGGCCATAG ACAGAGCTTC GCAGGACGGT GAGGCAGTAC TGGATTTGCC GCGCTCGTGG 
ATACCCGGCA GCCATGACTT CAGCTTTAGC GGACTGAAAA CCGCCCTGCT CCGGCTGGTG 
GAAAACGGCG AAGTCTGTTC GGTAAATGAC GCCGCCGCCA GCTTTCAAAA AGCGGTGGTA 
GATGTACTGG TAACCAAGAC CCTGAACTGC GCCCATGAGT ACAACGTAAA GCAGATACTG 
CTGGCAGGCG GAGTGGCCGC CAATAACCTG CTGCGTAAAC AGCTAAGCGA ACAATCCCCT 
CTGCCGGTTT CCATACCACC CATAGGCTTA TGTACCGACA ATGCCGCCGT AATAGCCTCC 
TGCGGCTATT TCCGCTTTAT ATCCGGCGGT CAGGACAGGC TGGACATGGA TGTACTGCCG 
GCGCTGTCCG TTGTTTCCTG A 

 

Protein sequence

MKILGIESSC DETAAAVVAD GVNILSNRVS SQIDIHSRYG GVVPEVASRQ HLLSILPVIS 
DALKEARTGF DEISAIAVTN GPGLAGSLIV GVNAAKAIAA ARGIPLVAVN HLHGHIYANW 
LSGRIPEFPC LCLTVSGGHT DLVLMKGHGQ YQLLGRTRDD AAGEAFDKAA RILGLSYPGG 
PAIDRASQDG EAVLDLPRSW IPGSHDFSFS GLKTALLRLV ENGEVCSVND AAASFQKAVV 
DVLVTKTLNC AHEYNVKQIL LAGGVAANNL LRKQLSEQSP LPVSIPPIGL CTDNAAVIAS 
CGYFRFISGG QDRLDMDVLP ALSVVS