Gene DET1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1391 
SymbolpolA 
ID3229334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1256490 
End bp1259201 
Gene Length2712 bp 
Protein Length903 aa 
Translation table11 
GC content50% 
IMG OID637120952 
ProductDNA-directed DNA polymerase I 
Protein accessionYP_182100 
Protein GI57233870 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains 
TIGRFAM ID[TIGR00593] DNA polymerase I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.958554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC CTGTAATAGT CCTCTTTGAC GGCACTAACC TTGTTCACCG GGCATATCAT 
GTACTTCCTC CGCTTGCCAT CCGCAAAACA GGTGAAGTAG TGGGTGCCGC TTTTGGTTTC
GCCTCCATAC TGATTAAAGT CTTAACAGAC CTTAAACCGG ATTGTTATGC CATATCCTTT
GACAGAAAAG GCCCAACCTT CCGCCATGAA ATGTTCAAAG CATACAAAGC CCAGCGTCCG
CCCATGCCTG ACGAACTGGT CAGCCAGCTG GGGCGGGTAC GCCAGATTGT AGATGCTTTT
AATATGCCGG TATACGAACA GAGCGGCTTT GAGGCTGATG ATGTGCTGGG TACGCTGGCA
ACCAGAGCCG CTGCCGCAGG TATGGAGGTT ATTATAGCCT CCGGGGACGC AGACTCTATG
CAGCTGGTCG GGCCGGATAT CCGCATTTTG TATCCCGGTC CGGCAGGTTC TTTTGCCAGC
ACCAGTTTGT ATGACGAGGT GGCGGTAAGG GCAAAATACG GTCTGGGGCC GGAGCATATT
GCTGATTACA AAGCCCTTAT GGGTGACCCT TCTGACAATA TCCCCGGAGT ACCCGGCATA
GGCCCGAAAA CCGCCCAGAA ACTTATAGAA GAGTACGGCG GCATAGAAGA TATTTATAAA
AATCTGGATA AAATAAGCCC GCCCGGTCTT CAGAAAAAGC TGGCAGACAA TGCCGAAGTA
GCCCGTGACA GTAAAATACT GACTACTATC GTGTGCGATT TACCGCTTGA TTTCAGTATT
GAGGAATGCC GGGCAGAGCA CTATAACCGC CAGAAAGTGG TAGACCTATT CCGTGAGCTG
GAGTTTTTCA GGCTGATTGA CCGCCTGCCG GGAGGGGAAA ACCAGCTTCA GGGTACGCCG
GATATGTTCG CTGTTGCTTC AAAGGTTGAG ACCCGCTATA TGGTGGCAGA CAGCCAAAAT
ATAGACAGTA TTGTAAGCCG CCTGGCAAAT GCCAAAGAGC TGGCGCTGGC GGTTTCGGGT
ACTCCCGAAG AAGCTATGGA TGCCCGCCTG ACGGCACTGG CACTTTCAAG TGCGGCGGGT
GATGCCTGTT TTGTACCCGC TGAGTTTATC GGCAGTGCTT CAGAAGGGCA GATGTTTGCC
GCCGAAGGGC ATTCCGGCTT GGCAGCTCTG CTTGGTGATG AAAAAATAAG TAAAACCGCC
CATAACGCCA AGTACCTTAT GAATTTGCTT TTATCTGCCG GGCAGGCAGT AAAAGGGCTG
GATTTTGATA CAATGATTGC CGCCCATCTT CTGGGTGAAA AAAATCTGGC TATCAAAGAC
CTTGTCTTTG AGCATTTCGG CATAGAGATT GCGGATATTG AAAATATACT GACCCGAAAC
GGTAAAAAAG CCAGTTTCAG CGAGGTTCAG CTTTCAGAAG CGGCTCAGCT TGCGGCTGAT
TACACTTTCC GCCTCAAAGG TATCTTTGCC GCCCAGCTTG CCGAAACCAG GCTGATGGAT
TTATTTGCCA GGGTGGAAAT GCCCCTTTTG CCCATACTGC TGGGCATGGA ACGCACCGGC
ATTATGCTGG ATACAGATTT GCTGAAGGCT ATGGCTGAAA AGACAGGCAG GCAGATATTT
AAACTGGAAG AAGATATCTA TGCCCGGGCC GGGCATAACT TTAACATAGG CTCCCCTCAG
CAGCTGGGGC GGATACTCTT TGACGAACTG AAACTGCCGG TTATCAAAAA GACCAAAACC
GGCTATTCCA CCGGGGCAGA GGTGCTTGAA GAACTGAAGG GCAAGCACCG TATTGTAGAC
CTGATACTGG AATACCGTAT GCTGGTAAAG CTGAAATCTA CTTATCTGGA TACCCTGCCG
CGTATGGTAA ATCCGCATAC CCGGCGGCTG CATACCAGTT TTAATCAGAC CCGTACAGCT
ACCGGCAGGT TATCTTCTTC CGAGCCTAAT TTGCAAAACA TACCTGTCAG GGGGGAAATG
GGCAGGGAGA TACGGCGGGC ATTTATTGCA CCTCCCGGCA CAGTGCTGCT GGCGGGAGAT
TACTCCCAAA TAGACCTCAG GGTGCTGGCC CATCTTTCCC AGGACCCCGC CCTGATAGAG
GCTTTCCAAA GTGACCAGGA TATTCACACC GCTACCGCCG CCAGATTGCT GAACATTCCC
CCGTCAAAGG TGACTAAAGA ACAACGCCGC TTGGCTAAAA CGGTAAATTT CGGGGTGATA
TACGGCATGA GCAGCTACGG GTTGGAACAG GCTACCGAGC TTTCGCTGGA AGAAGCCGAC
AAATTTATAA AAGCCTATTT TGAAAAATAT CCGCGGGTGG CTGTTTATTT CTCGGAGATT
AAGCAGCAGG TGCGTACTCA GGGTTATGTG GAAACCCTGC TGGGCAGACG CCGCTATATA
CCGGAAATCA ATTCACCCAA CCGTATTTTG CGTGAATCAG CCGAGCGTAT GGCTATCAAT
ATGCCGGTAC AGGGGACATC TGCTGACATT ATCAAGCTGG CTATGGTCCG GCTGGACGAA
AAGCTTAAAG AAGAAAAGCT GAAAAGCCGC CTGCTTCTTC AGGTGCATGA CGAGCTTATA
TTTGAAGTAC CCAAGACAGA GCTTGGGCGG ATGAGTGATT TGCTTGTAGA AACCATGTCA
GGTGCAGTTG CCTTTGAAAT ACCGCTCAAG GTTGAGCTTA AGTCCGGGGC TAACTGGGGA
GATATGGAGT AA
 
Protein sequence
MNKPVIVLFD GTNLVHRAYH VLPPLAIRKT GEVVGAAFGF ASILIKVLTD LKPDCYAISF 
DRKGPTFRHE MFKAYKAQRP PMPDELVSQL GRVRQIVDAF NMPVYEQSGF EADDVLGTLA
TRAAAAGMEV IIASGDADSM QLVGPDIRIL YPGPAGSFAS TSLYDEVAVR AKYGLGPEHI
ADYKALMGDP SDNIPGVPGI GPKTAQKLIE EYGGIEDIYK NLDKISPPGL QKKLADNAEV
ARDSKILTTI VCDLPLDFSI EECRAEHYNR QKVVDLFREL EFFRLIDRLP GGENQLQGTP
DMFAVASKVE TRYMVADSQN IDSIVSRLAN AKELALAVSG TPEEAMDARL TALALSSAAG
DACFVPAEFI GSASEGQMFA AEGHSGLAAL LGDEKISKTA HNAKYLMNLL LSAGQAVKGL
DFDTMIAAHL LGEKNLAIKD LVFEHFGIEI ADIENILTRN GKKASFSEVQ LSEAAQLAAD
YTFRLKGIFA AQLAETRLMD LFARVEMPLL PILLGMERTG IMLDTDLLKA MAEKTGRQIF
KLEEDIYARA GHNFNIGSPQ QLGRILFDEL KLPVIKKTKT GYSTGAEVLE ELKGKHRIVD
LILEYRMLVK LKSTYLDTLP RMVNPHTRRL HTSFNQTRTA TGRLSSSEPN LQNIPVRGEM
GREIRRAFIA PPGTVLLAGD YSQIDLRVLA HLSQDPALIE AFQSDQDIHT ATAARLLNIP
PSKVTKEQRR LAKTVNFGVI YGMSSYGLEQ ATELSLEEAD KFIKAYFEKY PRVAVYFSEI
KQQVRTQGYV ETLLGRRRYI PEINSPNRIL RESAERMAIN MPVQGTSADI IKLAMVRLDE
KLKEEKLKSR LLLQVHDELI FEVPKTELGR MSDLLVETMS GAVAFEIPLK VELKSGANWG
DME