Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1391 |
Symbol | polA |
ID | 3229334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1256490 |
End bp | 1259201 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120952 |
Product | DNA-directed DNA polymerase I |
Protein accession | YP_182100 |
Protein GI | 57233870 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.958554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC CTGTAATAGT CCTCTTTGAC GGCACTAACC TTGTTCACCG GGCATATCAT GTACTTCCTC CGCTTGCCAT CCGCAAAACA GGTGAAGTAG TGGGTGCCGC TTTTGGTTTC GCCTCCATAC TGATTAAAGT CTTAACAGAC CTTAAACCGG ATTGTTATGC CATATCCTTT GACAGAAAAG GCCCAACCTT CCGCCATGAA ATGTTCAAAG CATACAAAGC CCAGCGTCCG CCCATGCCTG ACGAACTGGT CAGCCAGCTG GGGCGGGTAC GCCAGATTGT AGATGCTTTT AATATGCCGG TATACGAACA GAGCGGCTTT GAGGCTGATG ATGTGCTGGG TACGCTGGCA ACCAGAGCCG CTGCCGCAGG TATGGAGGTT ATTATAGCCT CCGGGGACGC AGACTCTATG CAGCTGGTCG GGCCGGATAT CCGCATTTTG TATCCCGGTC CGGCAGGTTC TTTTGCCAGC ACCAGTTTGT ATGACGAGGT GGCGGTAAGG GCAAAATACG GTCTGGGGCC GGAGCATATT GCTGATTACA AAGCCCTTAT GGGTGACCCT TCTGACAATA TCCCCGGAGT ACCCGGCATA GGCCCGAAAA CCGCCCAGAA ACTTATAGAA GAGTACGGCG GCATAGAAGA TATTTATAAA AATCTGGATA AAATAAGCCC GCCCGGTCTT CAGAAAAAGC TGGCAGACAA TGCCGAAGTA GCCCGTGACA GTAAAATACT GACTACTATC GTGTGCGATT TACCGCTTGA TTTCAGTATT GAGGAATGCC GGGCAGAGCA CTATAACCGC CAGAAAGTGG TAGACCTATT CCGTGAGCTG GAGTTTTTCA GGCTGATTGA CCGCCTGCCG GGAGGGGAAA ACCAGCTTCA GGGTACGCCG GATATGTTCG CTGTTGCTTC AAAGGTTGAG ACCCGCTATA TGGTGGCAGA CAGCCAAAAT ATAGACAGTA TTGTAAGCCG CCTGGCAAAT GCCAAAGAGC TGGCGCTGGC GGTTTCGGGT ACTCCCGAAG AAGCTATGGA TGCCCGCCTG ACGGCACTGG CACTTTCAAG TGCGGCGGGT GATGCCTGTT TTGTACCCGC TGAGTTTATC GGCAGTGCTT CAGAAGGGCA GATGTTTGCC GCCGAAGGGC ATTCCGGCTT GGCAGCTCTG CTTGGTGATG AAAAAATAAG TAAAACCGCC CATAACGCCA AGTACCTTAT GAATTTGCTT TTATCTGCCG GGCAGGCAGT AAAAGGGCTG GATTTTGATA CAATGATTGC CGCCCATCTT CTGGGTGAAA AAAATCTGGC TATCAAAGAC CTTGTCTTTG AGCATTTCGG CATAGAGATT GCGGATATTG AAAATATACT GACCCGAAAC GGTAAAAAAG CCAGTTTCAG CGAGGTTCAG CTTTCAGAAG CGGCTCAGCT TGCGGCTGAT TACACTTTCC GCCTCAAAGG TATCTTTGCC GCCCAGCTTG CCGAAACCAG GCTGATGGAT TTATTTGCCA GGGTGGAAAT GCCCCTTTTG CCCATACTGC TGGGCATGGA ACGCACCGGC ATTATGCTGG ATACAGATTT GCTGAAGGCT ATGGCTGAAA AGACAGGCAG GCAGATATTT AAACTGGAAG AAGATATCTA TGCCCGGGCC GGGCATAACT TTAACATAGG CTCCCCTCAG CAGCTGGGGC GGATACTCTT TGACGAACTG AAACTGCCGG TTATCAAAAA GACCAAAACC GGCTATTCCA CCGGGGCAGA GGTGCTTGAA GAACTGAAGG GCAAGCACCG TATTGTAGAC CTGATACTGG AATACCGTAT GCTGGTAAAG CTGAAATCTA CTTATCTGGA TACCCTGCCG CGTATGGTAA ATCCGCATAC CCGGCGGCTG CATACCAGTT TTAATCAGAC CCGTACAGCT ACCGGCAGGT TATCTTCTTC CGAGCCTAAT TTGCAAAACA TACCTGTCAG GGGGGAAATG GGCAGGGAGA TACGGCGGGC ATTTATTGCA CCTCCCGGCA CAGTGCTGCT GGCGGGAGAT TACTCCCAAA TAGACCTCAG GGTGCTGGCC CATCTTTCCC AGGACCCCGC CCTGATAGAG GCTTTCCAAA GTGACCAGGA TATTCACACC GCTACCGCCG CCAGATTGCT GAACATTCCC CCGTCAAAGG TGACTAAAGA ACAACGCCGC TTGGCTAAAA CGGTAAATTT CGGGGTGATA TACGGCATGA GCAGCTACGG GTTGGAACAG GCTACCGAGC TTTCGCTGGA AGAAGCCGAC AAATTTATAA AAGCCTATTT TGAAAAATAT CCGCGGGTGG CTGTTTATTT CTCGGAGATT AAGCAGCAGG TGCGTACTCA GGGTTATGTG GAAACCCTGC TGGGCAGACG CCGCTATATA CCGGAAATCA ATTCACCCAA CCGTATTTTG CGTGAATCAG CCGAGCGTAT GGCTATCAAT ATGCCGGTAC AGGGGACATC TGCTGACATT ATCAAGCTGG CTATGGTCCG GCTGGACGAA AAGCTTAAAG AAGAAAAGCT GAAAAGCCGC CTGCTTCTTC AGGTGCATGA CGAGCTTATA TTTGAAGTAC CCAAGACAGA GCTTGGGCGG ATGAGTGATT TGCTTGTAGA AACCATGTCA GGTGCAGTTG CCTTTGAAAT ACCGCTCAAG GTTGAGCTTA AGTCCGGGGC TAACTGGGGA GATATGGAGT AA
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Protein sequence | MNKPVIVLFD GTNLVHRAYH VLPPLAIRKT GEVVGAAFGF ASILIKVLTD LKPDCYAISF DRKGPTFRHE MFKAYKAQRP PMPDELVSQL GRVRQIVDAF NMPVYEQSGF EADDVLGTLA TRAAAAGMEV IIASGDADSM QLVGPDIRIL YPGPAGSFAS TSLYDEVAVR AKYGLGPEHI ADYKALMGDP SDNIPGVPGI GPKTAQKLIE EYGGIEDIYK NLDKISPPGL QKKLADNAEV ARDSKILTTI VCDLPLDFSI EECRAEHYNR QKVVDLFREL EFFRLIDRLP GGENQLQGTP DMFAVASKVE TRYMVADSQN IDSIVSRLAN AKELALAVSG TPEEAMDARL TALALSSAAG DACFVPAEFI GSASEGQMFA AEGHSGLAAL LGDEKISKTA HNAKYLMNLL LSAGQAVKGL DFDTMIAAHL LGEKNLAIKD LVFEHFGIEI ADIENILTRN GKKASFSEVQ LSEAAQLAAD YTFRLKGIFA AQLAETRLMD LFARVEMPLL PILLGMERTG IMLDTDLLKA MAEKTGRQIF KLEEDIYARA GHNFNIGSPQ QLGRILFDEL KLPVIKKTKT GYSTGAEVLE ELKGKHRIVD LILEYRMLVK LKSTYLDTLP RMVNPHTRRL HTSFNQTRTA TGRLSSSEPN LQNIPVRGEM GREIRRAFIA PPGTVLLAGD YSQIDLRVLA HLSQDPALIE AFQSDQDIHT ATAARLLNIP PSKVTKEQRR LAKTVNFGVI YGMSSYGLEQ ATELSLEEAD KFIKAYFEKY PRVAVYFSEI KQQVRTQGYV ETLLGRRRYI PEINSPNRIL RESAERMAIN MPVQGTSADI IKLAMVRLDE KLKEEKLKSR LLLQVHDELI FEVPKTELGR MSDLLVETMS GAVAFEIPLK VELKSGANWG DME
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