Gene DET1374 details

Gene Information

• Locus tag: DET1374
• Symbol: lspA
• ID: 3229325
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1241512
• End bp: 1241994
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120936
• Product: lipoprotein signal peptidase
• Protein accession: YP_182085
• Protein GI: 57233861
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000912047
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAGGG GATTAGTATT TTTTGTCAGC GCCGCTTGCG GCGTTCTGGC TGACCAGCTA 
AGCAAATTTA TTATTGCCGC TAACCTTACC CCGGGCACAG CCATACCGGA AAGCGGTTTC 
TTCCAGATTG TCCACGTTCA TAATACCGGC GCGGCTTTCA GTATTTTCAG GGGGCACACC 
GAGTGGCTTA TTGCCGCCAG CTGTCTGGGA GTAATACTGG CCCTGACCGC TTTCTTCTTA 
AGGAAAAAAC TGCCGTTTTT GGATACCCGC CCCGGTGTAG CCGCTTTGGG AATTATCCTG 
GCAGGTACGA TAGGCAACCT GATTGACCGG GTGCGGCTGG GTTATGTTAC TGACTTTATA 
CAGGTAGGGA ATTTCCCTAC TTTCAATATG GCTGATTCCT GCCTGACGCT GGGCATTATC 
TGGCTGGTGC TCTTATACCT GACATCTTCC CATTCGGGAG GAGATGCCAG TGAAAACGCG 
TAA 

 

Protein sequence

MTRGLVFFVS AACGVLADQL SKFIIAANLT PGTAIPESGF FQIVHVHNTG AAFSIFRGHT 
EWLIAASCLG VILALTAFFL RKKLPFLDTR PGVAALGIIL AGTIGNLIDR VRLGYVTDFI 
QVGNFPTFNM ADSCLTLGII WLVLLYLTSS HSGGDASENA