| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1350 |
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| Symbol | |
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| ID | 3229372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 1219838 |
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| End bp | 1220515 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637120912 |
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| Product | LuxR family DNA-binding response regulator |
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| Protein accession | YP_182061 |
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| Protein GI | 57233907 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00111586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGACA ACAGTAAGAT CAGGGTAATG GTCATAGATG AGCAACCTTT TTTCAGGGCG
GGTGTTGCCC AGGCCTTATC CGACAACAAC TTTGAGATAC TCCCAACCGA TACCCACAGA
GACCCAATGG AACAGATTGA GAGCAGCCTG CCGGATGTGG TACTTTTGGG TTCAGACCTG
GTGGCGTACA GCGGGCTAGA TTTGGGCAGG CGGATTGTAC GCACCTTCCC CAATACCAAG
GTTATTATCC TTTCCCCAAA CCCGAATGAT ACCGAGCTGT TTGAATGCAT CAGGACAGCG
GCTGTGGCCT GTTTGAAAAA AAGCAGCACG GCTGATGAGC TTATTGAGAC TATCCGCCGG
GCTAACCGGG GAGAATACCC TATAAATGAA AGCCTGATGA CCAGCCCCAA CCTGGCCAAA
CAGGTGCTGG CCCAGTTTCA AGACGTATCC CTGCTGGGCA AAGATGCTTC CAATTTCGTT
ACCCCTTTAA CCAACCGCAA AAAACAGATA CTGACCCTTA TTGCCAATGG CAATACCAAC
AAACAGATTG CCAACAATCT GGAAATAAGT GAACAGACCA TAAAGAACCA CGTCAGCGCC
ATTTTACGCA AATTGAACGC TAATGACCGG GCACACGCTG TTGTAGTGGC CATCCGCTGC
GGCTTGATAA ATATATAA
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| Protein sequence | MEDNSKIRVM VIDEQPFFRA GVAQALSDNN FEILPTDTHR DPMEQIESSL PDVVLLGSDL
VAYSGLDLGR RIVRTFPNTK VIILSPNPND TELFECIRTA AVACLKKSST ADELIETIRR
ANRGEYPINE SLMTSPNLAK QVLAQFQDVS LLGKDASNFV TPLTNRKKQI LTLIANGNTN
KQIANNLEIS EQTIKNHVSA ILRKLNANDR AHAVVVAIRC GLINI
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