| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1346 |
|---|
| Symbol | |
|---|
| ID | 3229376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1216894 |
|---|
| End bp | 1217826 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637120908 |
|---|
| Product | carbohydrate kinase |
|---|
| Protein accession | YP_182057 |
|---|
| Protein GI | 57233911 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
|---|
| TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACCA CCGTTACCCT AAACCCCTGT CTGGACAAAC ACATAGACGT GCATGGTCTG
GTACTGTACG AAACTAACCG CTGGCATCTT ATGTCCAAAT ATGCCGGCGG CAAAGGCATA
GATGTGTCAC GGGCGATACA TGAAATGGGA AATGATACCA TTGCCTGCGG TTTTCTGGGC
AGTGAAGAGG GACGGGAGAT AGAAACCCTG CTTGCAAAAC AGGGGCTTAA ATACCGCTTC
ACTCCCATAA GCCAGCCTAC CCGAAGCTGT TTTATAATAT ACGACACTAA AACCCGCCGC
CAGACTAATC TTAACGCCCC CGGCCCGCGG ATAACGCCGT CTGAACTGAA ACTTTTTCAC
GAAGACCTGC ACAGGGAAAG CGCTTCGTCA AACATTATTG TTATGTCAGG CAGCGTACCG
CCGGGAATAC CTTCAAACGT CTATTTCACC CTTATCAAGA GCGCCCATAA ACTGGGCAAG
CAAACCATAC TGGATACCAC CGGCAAATAC CTGCGGGCAG GGCTTAAGGC TAAACCCTGT
CTGGTAAAGC CTAATATCCG CGAAGCGGAA GAGCTGCTGG GCAGGAAACT GGAAACCGAG
GCTGAAATAA TACTGGGGGC TAAGGAAATA GTCCAAATGG GAGCGGGCAT AGCGGTAATC
TCCATGGGCA AAAAGGGGCT GATAGCCAGT GACGGCAAGC AGGTTATAAA AGCCAGCTCT
CCCTATGTGC GGGTAAAAAG CGCGGTGGGG GCGGGTGATT CAACGGTGGC CGGCTTGGCC
ATATCCCTTT GCCGAGGGGA CAGTCTGGAA GAAGCCTGCC GTTTAGGTGT AGCCATGGGG
ACAGCCGCCG TGATGACGCC GGGCACCGAA CTCTGCCACC GCGAAGACGT TTTGTACTGG
CTGCCCCGCA TTAAAATCCG CCGTTTAGCT TAG
|
|---|
| Protein sequence | MITTVTLNPC LDKHIDVHGL VLYETNRWHL MSKYAGGKGI DVSRAIHEMG NDTIACGFLG
SEEGREIETL LAKQGLKYRF TPISQPTRSC FIIYDTKTRR QTNLNAPGPR ITPSELKLFH
EDLHRESASS NIIVMSGSVP PGIPSNVYFT LIKSAHKLGK QTILDTTGKY LRAGLKAKPC
LVKPNIREAE ELLGRKLETE AEIILGAKEI VQMGAGIAVI SMGKKGLIAS DGKQVIKASS
PYVRVKSAVG AGDSTVAGLA ISLCRGDSLE EACRLGVAMG TAAVMTPGTE LCHREDVLYW
LPRIKIRRLA
|
|---|
| |