Gene DET1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1269 
Symbol 
ID3229413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp1157561 
End bp1158259 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content39% 
IMG OID637120831 
ProductHNH endonuclease domain-containing protein 
Protein accessionYP_181981 
Protein GI57233948 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000309683 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATG AGATTAAACC GGGACAGGTA ATATCCTATC TTGATATGTG CCAAGCAGAG 
TCAGTCAATC TACAAAAAGG GATGAATTTC AAACTACGAA ATGGTCACAA TATTATACTT 
ATGAGTGTGC GTAATGGAGC ACCTTACGCT GACAGATTTG AGAACGATGG AACTATACTT 
ATATACGAAG GACATGACGT AAACAAAACA CCAGAACTCG TTAACCCAAA AAACATTGAT 
CAGCCAATGT ACACCCCAGG ACATAAACTT ACTGCTAACG GCCTTTTCTA TGAAGCCGCT 
CAAAAAGCCA AGCAAACCAA GATATTTCCT AAAGTTCGTG TTTATGAAAA GATAAAACCC 
GGCATATGGG TTTATAATGG TGTTTTCAAC CTAATTGATG CTTGGCAAGA GCCCTCTGAT 
AATCGTAAAG TCTTTAAGTT CAAACTAGAG CTAACTTCAG AGATTACTAA TGAAATAGCA 
ACGCCTACTT TAGATGCTGA TATAAGGGCT ATACCTTCAG ATATAAAACG AATTGTTTGG 
GCTAGAGACC AAGGTAAATG CGTAAAGTGC GGCAACAATT CAAACCTTCA TTTTGACCAT 
GTTATCCCCT ATTCCAAAGG TGGGTCATCG TTAATAGCTG AAAATATTCA ACTACTATGT 
GCCAGTTGTA ACCTCAGCAA GCATGCTAGC ATCGAGTAA
 
Protein sequence
MTDEIKPGQV ISYLDMCQAE SVNLQKGMNF KLRNGHNIIL MSVRNGAPYA DRFENDGTIL 
IYEGHDVNKT PELVNPKNID QPMYTPGHKL TANGLFYEAA QKAKQTKIFP KVRVYEKIKP 
GIWVYNGVFN LIDAWQEPSD NRKVFKFKLE LTSEITNEIA TPTLDADIRA IPSDIKRIVW 
ARDQGKCVKC GNNSNLHFDH VIPYSKGGSS LIAENIQLLC ASCNLSKHAS IE