Gene DET1258 details

Gene Information

• Locus tag: DET1258
• Symbol: argD
• ID: 3229441
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1144710
• End bp: 1145906
• Gene Length: 1197 bp
• Protein Length: 398 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120820
• Product: acetylornithine aminotransferase
• Protein accession: YP_181970
• Protein GI: 57233976
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4992] Ornithine/acetylornithine aminotransferase
• TIGRFAM ID: [TIGR00707] acetylornithine and succinylornithine aminotransferases

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00185503
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAACT GGCAAGAGCT TGAACATAAA TATTACATGC AGACTTTTTA CCGCGCACCC 
ATCACTATTG TTAAGGGGCA GGGAGCAAAG GTCTGGGATG ATAAGGGTAA AGAATATCTG 
GATTTTGTAG CCGGCTGGGC GGTAAACAGC CTGGGGCACT GTCACCCGGC AGTAGTCAAA 
GCGGTCTCAG AGCAGGCTGG CACACTTATC CAGACTTCCA ACAATTTTTA TACCATTCCC 
CAGCTTAAAC TGGCCAAACT GCTGGTTGAT AACAGCGTAC TGGACCGTAT TTTCTTCTGC 
AACAGCGGCA CCGAAGCTAC CGAAGGGGCA GTTAAGCTTG CCCGCCGCTA CGGTAAACTC 
AAACTAAAAG GGGCTTACGA AGTAATTACC GCCACCGGTT CTTTCCACGG GCGGACCCTG 
GCCATGGTTT CGGCCTCCGG CCAGAGTAAA TACCAGGAGC CGTATACCCC CCTGCCAACC 
GGTTTTATAA ACGTGGAGTA CAATAATCCC CAGGCTATAA AAACGGCCAT TACAGACAAA 
ACCTGTGCCG TTATGCTTGA ACCCATACAG GGTGAAAGCG GGGTAAACGT ACCTGATAAA 
GGCTACCTTA AAGCTGTCCG CCAAATATGT GATGAGGCTG GCATACTGCT GATACTGGAT 
GAAATCCAGA CCGGTATCGG CCGTACCGGC AAACTTTTTG CTTATGAACA TTCCGGCATT 
GAGCCGGATA TTATTACTCT GGCCAAAGGG CTGGCTGGCG GCATACCCAT AGGTGCATTT 
ATGGCTAAGG AGAGCGCTTC GGTCTTTGCC AAGGGGGAAC ATGGCTCTAC CTTCGGCGGC 
AACCCGCTGG CCTGTGCCGC CGGATATGCG GCTATGAAGT TTATTCTGGA CAACCATATC 
TCCGAAAACG CCGGCAGCAT GGGCAGCTAC CTTGCTGAAG GGCTTGAAAA ACTTAAAATA 
AAACACAGCC TTATACAGGG CTGCCGCGGC TGCGGTCTGC TGATGGCACT GGACTTTAAA 
ACCAATATTG CCAAAGAAAT AGTCGAAAGC TGCCTGGAAG AAGGGCTGCT GCTGAATGCG 
GTTAAGCCCA ATGCCCTGCG GTTTATGCCC CCGCTGAATA TCACCCAAGC AGATATAGAT 
GCGGCAATTG CCAAGCTGGA TAGTGTGCTT ACCCGGCATG AAAGCTGCGG GGTTTAG 

 

Protein sequence

MDNWQELEHK YYMQTFYRAP ITIVKGQGAK VWDDKGKEYL DFVAGWAVNS LGHCHPAVVK 
AVSEQAGTLI QTSNNFYTIP QLKLAKLLVD NSVLDRIFFC NSGTEATEGA VKLARRYGKL 
KLKGAYEVIT ATGSFHGRTL AMVSASGQSK YQEPYTPLPT GFINVEYNNP QAIKTAITDK 
TCAVMLEPIQ GESGVNVPDK GYLKAVRQIC DEAGILLILD EIQTGIGRTG KLFAYEHSGI 
EPDIITLAKG LAGGIPIGAF MAKESASVFA KGEHGSTFGG NPLACAAGYA AMKFILDNHI 
SENAGSMGSY LAEGLEKLKI KHSLIQGCRG CGLLMALDFK TNIAKEIVES CLEEGLLLNA 
VKPNALRFMP PLNITQADID AAIAKLDSVL TRHESCGV