| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1238 |
|---|
| Symbol | |
|---|
| ID | 3229479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1133960 |
|---|
| End bp | 1134778 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637120801 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_181951 |
|---|
| Protein GI | 57234013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000496143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAA GCCTCAGACG TATTGCCTTT ATGAGCCTTG TTTGCCTGCT TTTGGTACTC
TCTGCCTGTG GCGGAGGAAA TGACCCTGAC AGTAACGCAT CTAATCCCCC CCCAGATGAT
AACTCCAACA ATTCCTCCAA TCCGCCGCCT GTATATGACC CCTATGCCCA GTATGAGGGA
TACCTGCTGC AAGGATACCC TGAGCAGATG TGGCCGCTTT ATGAGAGCAA GGCCATAAGC
TCCTGCAATT TAGATGTGTT TTTCCCCGGT TTTAATATGA ACCCGGGATA TGTATGTACG
TACAATGTTG TTTACTACAG CGAAAAGCCC AAAGCCGAGA TTGTAGCTTA TTATGCCGGG
CTTGCCGGAA GCCTGAACCC TTCCAGCTTT TACGACGTGG ACACTGATAT AAATAATTAT
CACTTTACCG CCAGAGTTGT AGAAGAAGGC AGCCGTAATC TGATTTACCT GGCGGCTGAT
ATGCCTGATA ACTTTTATAC CGAACATCCT CTTTGGGGGG ATTTCCCGTC AGATGTATTC
CCCGTTTTTA ACCTTACCCA GCAGCGATAC CATGACGTAG CCTGCCGGAG CAACGGAGAC
GGTGAACTTC AGTACACCAA TCACTATAAT TTCAGCGGCG GCAGACAGGC CGCAGTGGAA
TACTACCGCG CCCGGCTGCA GAATATGGCT GAATATGCCG AAACTACAAA TTCGGATAGT
ACCTGCACAA CTCTTTCCGG CGTAGTACGC GGCTTTGACT TTCAGGTATT GATTTACGAT
GACAATATTG CAGTTTTCCT GGAAAAGCCG TTTGACTAA
|
|---|
| Protein sequence | MKKSLRRIAF MSLVCLLLVL SACGGGNDPD SNASNPPPDD NSNNSSNPPP VYDPYAQYEG
YLLQGYPEQM WPLYESKAIS SCNLDVFFPG FNMNPGYVCT YNVVYYSEKP KAEIVAYYAG
LAGSLNPSSF YDVDTDINNY HFTARVVEEG SRNLIYLAAD MPDNFYTEHP LWGDFPSDVF
PVFNLTQQRY HDVACRSNGD GELQYTNHYN FSGGRQAAVE YYRARLQNMA EYAETTNSDS
TCTTLSGVVR GFDFQVLIYD DNIAVFLEKP FD
|
|---|
| |