Gene DET1227 details

Gene Information

• Locus tag: DET1227
• Symbol: dnaN
• ID: 3229498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1125734
• End bp: 1126870
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120790
• Product: DNA polymerase III, beta subunit
• Protein accession: YP_181940
• Protein GI: 57234032
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog)
• TIGRFAM ID: [TIGR00663] DNA polymerase III, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000128167
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTA CATGCTTACA GGAAAATCTG AACAAGGGTC TAAACATTGT GGGCAAAGCG 
GCTGCCGGCC GGACTACCCT GCCCATTACC AACAATGTCC TTATCTCAAC TGATGACGGA 
CGTTTAAAAC TAGCCGCCAC CAATCTCGAA ATGGCTATCA GCTGCTGGAT AGGAGCCAAG 
ATAGAGGAAG AAGGGAGCAC CACCGTACCT GCCAAACTCC TGACCGAATT TGTCAGCTCT 
CTGCCCAATG ATAAAATAGA ATTAAACCTT AATGCCAAGT CAAAGGCACT CAATATCAAA 
TGCGCCCGCT TTGAGGCACG CATAACAGGC GTTGACGCAA AAGACTTCCC GCCTGTACCC 
AAAGTGGAAA ACGGCATCTC CACCAAGATT AACGTTGAGG CCTTCCGCCA GGCCGTAAGC 
GAAGTGGTAT TTGCTTCGGC AACTGACGAA TCCCGCCCGG TGCTCACTGG TGTCAACGCC 
GAATTTGAAG GCAGCACCCT AACTCTGGCT GCAGCTGACG GTTTCCGTTT GGCTGTCTAT 
AAACTGCCTC TGCTGGAAGC GGTAAAAACC GCTACTAAAG TAATCATTCC AGCCCGTACA 
CTGGGTGAGC TTTCCCGCCT GGCCAGCATG GACGAGGAAG AAGCCCTGAT GATAAATGTA 
GATACTGCCA AGAGCCAGAT ACTTTTCAGG CTTAAAAATA TTGAGTTGGT ATCTCAGCTG 
GTACAGGGAA ATTTCCCCCA GTACAACCAG ATAATCCCCC AAAGCTTTAC TACCAAAGTG 
GTAGTAGATG CCAACCAGTT CCTTATGGCC ACCAGAACGG CTACAATCTT TGCCCGTGAC 
GGCGGCGGCA TAGTCCGGCT GATGATGAAC CCCGGAGGCA ATAATACCCC CGGTAAGCTC 
ACCATCTCCG CCCGCTCTGA AGAAGTGGGT GACAATACCG GTGAACTTGA TGCCGTAGTT 
CAGGGTGAGG AAGCTAAAAT AGCCTTCAAC GGCAAATATC TTCTGGACGT CCTGGGAGTA 
CTTAAAGCCC AGCAAGTATC ACTGGAAGTA ACCAGCCCGT CAAGCCCCGG TGTGATAAAA 
CCGGTGGGGG CGGACAACTA CATCCACGTT ATTATGCCCA TGTTCGTGCA GTGGTGA 

 

Protein sequence

MKLTCLQENL NKGLNIVGKA AAGRTTLPIT NNVLISTDDG RLKLAATNLE MAISCWIGAK 
IEEEGSTTVP AKLLTEFVSS LPNDKIELNL NAKSKALNIK CARFEARITG VDAKDFPPVP 
KVENGISTKI NVEAFRQAVS EVVFASATDE SRPVLTGVNA EFEGSTLTLA AADGFRLAVY 
KLPLLEAVKT ATKVIIPART LGELSRLASM DEEEALMINV DTAKSQILFR LKNIELVSQL 
VQGNFPQYNQ IIPQSFTTKV VVDANQFLMA TRTATIFARD GGGIVRLMMN PGGNNTPGKL 
TISARSEEVG DNTGELDAVV QGEEAKIAFN GKYLLDVLGV LKAQQVSLEV TSPSSPGVIK 
PVGADNYIHV IMPMFVQW