Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1219 |
Symbol | mutS |
ID | 3229472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 1118939 |
End bp | 1121515 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637120782 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_181932 |
Protein GI | 57234006 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.34292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA TAACTCCCCT GCGTAAACAA TACCTGGATA TAAAAAAGAA CTACCCCGAA GCGATAGTCT TTTTCCGCTT GGGAGACTTT TACGAAACCT TTGAAGAAGA CGCCCGTATA GCCGCCCGCG AACTGGAAAT AGTCCTTACC AGCCGCGAAA TGGGCAAAGG GCTGAAAGTG CCGCTGGCCG GCATACCTTA CCACGCCCTG GATAACTACC TCTCACGCCT TATAAACCGC GGCTACAAGG TAGCCATTTG CGAACAGGTA ACCAAACCGG GCGAAACCAA GGGCTTAGTG AAAAGGCAGG TGACCCGTCT GGTGACCCCC GGTACGGTAG TTGAGCCGAA CCTGCTGGAT AGCAAACAGA ACAATTTTCT GCTCAGCCTG TACCTGACCG AAGACAGCTG CGGGCTGGCC TTTGCGGATA TATCCACCTC GGAGTTCGGC TGTACCCAGC TGGATATAAA CGGGCTGGAA GCCGAAATAA ACCGCCTGAA CCCGGCGGAA ATAATACTGC CTAAAAGCCA GAGCTTAAAC CTGCCACTGC ATCTGAAAGC CACTATAAGC AAGCTGGATG GATACTATTT TGAAGCAGAC GTGGCCCGTG AACGTTTACT TAAGCACTTT GAGTGCCAGA ACCTTTCCGC TTACGGCTGT GAAAACCTGC CGCTGGCCGT TTCGGCGGCG GGTGCTCTGC TTAACTATCT GGAGGAAACC CAGAAATCAT CCCTGAAGCA GCTGGAAAGG CTGGCCGCTT ATACTATATC TGACTATATG CAGATAGACA GCCATACGCT TTCCAATCTG GAAATCTTCC GCTCAAGCGG CGGGAACTCC CTCAAAGGGT CTTTACTGGG GGTGCTTGAC CAGACCAAAA CAGCTATGGG CGGCAGGCTT CTCCGCAAGT TTTTAGGACA GCCGCTGCTT AGGCAGGAAG ATATTGAAAA GCGGCTTTCG GCGGTGGATT ATTTTTTTGA AGAGAGTCTG GCACGCGCCA GCCTTGCCAA AGCACTGGGA CAGATTGCCG ATATGGAGCG GATAGCCAAC CGTATCCGCC AGAAAACCAT ACTCCCCAAG GAGCTGATTT CACTTAAAAA CAGCTTGGAA ACTGTTTCCG CCATTCACCG CCAGTTCGGG CTTATGCCGC CGCCCCGTTT GGCATATTTT CTAAACGGGC TTAAACCCCT GCCCGAAATG CTGGACATTG TAAACGAAGC TATTAACGAT GACCCGCCCT CCACCCTGGG TGAAGGCAAA GTAATACGGT CAGGTTTCAA CCCCGAAATG GATAAACTCT GCTCTCTGGC CGGGGACGCC AGAACATTCC TTTCCCAGAT GGAAGCCCGT GAACGGGAAC AGACCGGCAT AAAATCACTG AAGCTGGGGT ATAACCGGGT TTTCGGGTAT TACATAGAGG TGTCCAATGC CAATCTGGCT GACATACCCC AAAACTATAT CCGCAAGCAA ACGCTGGTAA ATGCTGAAAG GTTTATAACC CCCGAACTGA AAGAATACGA AAACCTTATC TTAAATGCTA AAGAACGCCT GCTGGAAATG GAAACCGGGC TTTACGAGCA GGTTTTAAAC CAGCTGGGGG GCTTTTACTC CGCTTTGCTC TCAAACGCCG CCGCTTTGGC ATCTTTAGAC GTACTTTCAG CCTTTGCCGA AGTAGCGGTA CGAAACGGCT ATGTCCGCCC GCTCTTTCAC TCTGAAAACA GCCTGGTTAT CCATAGAGGC CGCCACCCCA TGGTGGAACA GGGGCTGGGA TACGGCAGTT TTGCAGCTAA TGACATTTCC CTGTCCGCCG AAGACTGCCA GATAATTATC CTGACCGGCC CCAATATGGC CGGTAAATCC ACTTATCTTA AGCAGACCGC CCTTATTGTG CTGATGGCCC AGATAGGTTC TTATGTTCCG GCAGAAACCG CCGAACTCTG CCTGACAGAC CGTATTTTCA GCCGCATCGG GGCAAGGGAG GATTTAAGTG CCGGGCAGTC TACCTTCATG GTGGAAATGG TGGAAACAGC ATCTATACTG AATACTGCCA CCAGCCGCTC CCTGCTGATA CTGGACGAAA TAGGCCGCGG CACCAGTACC TATGACGGGC TGGCCATTGC CCAGGCGGTT GTGGAGTATA TTCATTCGCA GCCTTCACTG CATGCCAAAA CGCTCTTTGC CACCCACTAT CACGAACTGG TGGAGCTGGC AAACTATCTG CCCAGAGTAA AAAACTACAA TATTGCGGTC AGTGAAGACC GGGGGGAAGT GGTTTTCCTG CACAGGATAG TCCCCGGCGG AGTAGATAAA AGTTACGGTA TTCACGTGGC TAAACTGGCC GGGCTGCCGG GGTGGGTTAT AAAGCGGGCT TACGAAGTGC TTACAGAACT TGAAAATCCT GCTAAAAAAG AGCCGAAAAT ACGCAACTGC CAGCCGCAGC TTCTGCTGCC CCTGACAGAG CAGACTTCGG CGCTGGCAGA GGAAATAAAA GGGCTGGAAA TAGAATCTCT GACGCCGCTT GCAGCTCTTA ACAAACTTTA CGAACTGAAA AAGAAGGCCG AAGAACAGGG GCTTTAA
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Protein sequence | MENITPLRKQ YLDIKKNYPE AIVFFRLGDF YETFEEDARI AARELEIVLT SREMGKGLKV PLAGIPYHAL DNYLSRLINR GYKVAICEQV TKPGETKGLV KRQVTRLVTP GTVVEPNLLD SKQNNFLLSL YLTEDSCGLA FADISTSEFG CTQLDINGLE AEINRLNPAE IILPKSQSLN LPLHLKATIS KLDGYYFEAD VARERLLKHF ECQNLSAYGC ENLPLAVSAA GALLNYLEET QKSSLKQLER LAAYTISDYM QIDSHTLSNL EIFRSSGGNS LKGSLLGVLD QTKTAMGGRL LRKFLGQPLL RQEDIEKRLS AVDYFFEESL ARASLAKALG QIADMERIAN RIRQKTILPK ELISLKNSLE TVSAIHRQFG LMPPPRLAYF LNGLKPLPEM LDIVNEAIND DPPSTLGEGK VIRSGFNPEM DKLCSLAGDA RTFLSQMEAR EREQTGIKSL KLGYNRVFGY YIEVSNANLA DIPQNYIRKQ TLVNAERFIT PELKEYENLI LNAKERLLEM ETGLYEQVLN QLGGFYSALL SNAAALASLD VLSAFAEVAV RNGYVRPLFH SENSLVIHRG RHPMVEQGLG YGSFAANDIS LSAEDCQIII LTGPNMAGKS TYLKQTALIV LMAQIGSYVP AETAELCLTD RIFSRIGARE DLSAGQSTFM VEMVETASIL NTATSRSLLI LDEIGRGTST YDGLAIAQAV VEYIHSQPSL HAKTLFATHY HELVELANYL PRVKNYNIAV SEDRGEVVFL HRIVPGGVDK SYGIHVAKLA GLPGWVIKRA YEVLTELENP AKKEPKIRNC QPQLLLPLTE QTSALAEEIK GLEIESLTPL AALNKLYELK KKAEEQGL
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