Gene DET1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1210 
SymbolprfA 
ID3229489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1109405 
End bp1110472 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID637120773 
Productpeptide chain release factor 1 
Protein accessionYP_181923 
Protein GI57234023 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAA GATTAGAAAA CTGCGAAAAA CGCTTCCGGG AAATTGAAGA GGAAATAAGC 
AAACCGGAAG TTATAAATGA TGCCCGGCTG GTGCGTACTC TGGCCCAGGA GCGGGCTGAT
TTGCAGACCA AAGTGGAAAT GTACCGCCGC TATAAAGCCA TATCCAAAGA GCTTGAAGAT
ACCAAAAACC TGCTTGAGAT TGAAAAAGAC GAAGACATGA AGGACATGGT ACGCGGTGAG
ATTGCCAGCC TTGAAAAATC TATGGCAGAC CTCTACACCC AGATGACCCT TGAGCTTTTG
CCCAAAGACC CCAATGATGA CAAAAGCATT ATCATGGAAA TACGGGCAGG CACAGGCGGT
GACGAAGCCG GGCTGTTTGC CGCAGACCTG TATAAGATGT ATACCCGCTA TGCCCTGCTG
AAAAACTGGA AAACCGAAGT CATTGACATA AACGGCAACG TAGCCGGCAT TATCAAAGAA
GTAGTCTTTG AGGTAAACGG CAAAGGGGCT TTCAGCCGCT TGAAGTATGA ACGGGGTGTC
CACCGGGTAC AGCGTGTCCC CCAGACCGAG GCTTCCGGCC GTATCCATAC CTCTACCGCC
ACTGTCGCCG TCCTCCCCCA GGTAGAGGAA GTAGACATAG ATATAAATAT GGACGATGTA
AGGGTGGATA TATTTCATTC CAGCGGCGCC GGCGGACAGA ACGTCCAGAA AGTGGCTACT
GCCATCCGCC TGACCCATAT ACCCACGGGC TTGGTTGTCT GCTGTCAGGA CGAACGCTCA
CAGCTGAAAA ACAAGAACAA GGCCTTTGCG GTGCTGCGTG CCAGACTGAT GGAACTGGAA
CAAAGCAAGG TGGACGAAGA ACGCACTGAA AGCCGCCGCG CCCAGGTGGG ACAGGCAGAC
CGCAGTGAAA AAATACGCAC TTACAATTTC CCCCAGGACC GCCTGACAGA CCACCGGATA
GGGCTTACTG CCCATAACCT GCCCCACATA CTGGAAGGAT ATTTAGACGA AATTATTGAT
ACTTTGGCTA CTCACGAACA GACCGAACTT CTAAAGGGCG AAGATTAA
 
Protein sequence
MLERLENCEK RFREIEEEIS KPEVINDARL VRTLAQERAD LQTKVEMYRR YKAISKELED 
TKNLLEIEKD EDMKDMVRGE IASLEKSMAD LYTQMTLELL PKDPNDDKSI IMEIRAGTGG
DEAGLFAADL YKMYTRYALL KNWKTEVIDI NGNVAGIIKE VVFEVNGKGA FSRLKYERGV
HRVQRVPQTE ASGRIHTSTA TVAVLPQVEE VDIDINMDDV RVDIFHSSGA GGQNVQKVAT
AIRLTHIPTG LVVCCQDERS QLKNKNKAFA VLRARLMELE QSKVDEERTE SRRAQVGQAD
RSEKIRTYNF PQDRLTDHRI GLTAHNLPHI LEGYLDEIID TLATHEQTEL LKGED