Gene DET1189 details

Gene Information

• Locus tag: DET1189
• Symbol: ribE
• ID: 3229534
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 1084835
• End bp: 1085452
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637120752
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_181902
• Protein GI: 57234068
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTTACAG GCATAGTTGA GGAACTTGGC TTTTTAAAAG CCCGAAACCC CGCTTATTTG 
CACATTGGGG CAAAGCTGGT GCTGGAATCA CTGAAAGTGG GTGACAGCAT AGCGGTCAAT 
GGCGTCTGTC TGACAGTTAC CAGTTTTGAC AGTTCTTCTT TTCATGCGGA TATCATGCCC 
GAAACCCTGC GTCTTTCCAA TCTGGGCAAA CTGTCTTCTG ATTCACCTCT AAATCTGGAA 
CGGGCACTTA CTCTAAACAG CCGAATGGGC GGGCATCTGG TGCAGGGGCA CGTAGACGGC 
ACTGCCAGGT TAGTTTCCTC CGTACCTGAC GGCAGCGCCC GCCTGCTTAC CTTTGAAACA 
GACCAAGACC TTACCCGTTA TATGGTTCAT AAGGGATTTG TGGCGGTCAA CGGGGTCAGT 
TTAACTATTA CAGATTTACA GGCAAAGCGT TTTTCCATTT CGCTGGTGAA CCTGAGCGGC 
AAATCAACTA ATCTGGGTCT GCTAAAGCCG GGGGATACGG TAAACATAGA AACTGATATA 
ATAGGTAAAT ACGTGGAGAA ACTGTGCCGG ACAGAACGGG GCATAAGCCC GGAGTTTCTG 
GCCGAAAACG GTTTTTAA 

 

Protein sequence

MFTGIVEELG FLKARNPAYL HIGAKLVLES LKVGDSIAVN GVCLTVTSFD SSSFHADIMP 
ETLRLSNLGK LSSDSPLNLE RALTLNSRMG GHLVQGHVDG TARLVSSVPD GSARLLTFET 
DQDLTRYMVH KGFVAVNGVS LTITDLQAKR FSISLVNLSG KSTNLGLLKP GDTVNIETDI 
IGKYVEKLCR TERGISPEFL AENGF