Gene DET1180 details

Gene Information

• Locus tag: DET1180
• ID: 3229549
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1078019
• End bp: 1079932
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637120743
• Product: ABC transporter, ATP-binding/permease protein
• Protein accession: YP_181894
• Protein GI: 57234083
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCAGA ACAGAAATAC CCCTCAGTTA CGAATGCCGA TGGGCGGCAG ACCTATGGGC 
GGCGGCATGC ACATGGGCGG CGGACCTATG GGCGGAATGC GAATGGCACA ATCAGGTGAA 
AAGGCCAGAA ATTTTAAGGA CACCATGGCC AGCCTTTTGA AATACCTGAC ACCATACCGC 
TTTCCGCTTA TTATTGCTCT GGTATTAGCC ATTTTTGGTA CGGTATTTAC CATTATCGGC 
CCGAAACTGT TAGGCAATGC AACCACCAAG CTTTTTGAAG GCTTGGTCAG TAAAGTTACT 
AATGCAGCCG GTGCCGACAT TGATTTTACC TATATCGGCA ATATCGTACT GATTCTGGTC 
GGGCTGTACG TAATCAGTGC CATATGCAGC TATATTATGG GCTACATAAT GACCGGCGTA 
TCCATCAAGG TTACCTATGA CCTGCGCAAG CAGATAGCTG AAAAAATAAA CCGCCTGCCA 
ATGAAATTCT TTGACAACAA GACCTACGGC GAAGTGCTGA GCCACGTAAC CAACGATGTT 
GATTTGATAT CCAACACCCT GACCCAAAGC ATGTCACAAA TGGTTACCTC TATAGTTACC 
ATACTGGGCG TGCTGGTGAT GATGTTTACT ATAAACTGGA TTATGGCACT GGCTTCGCTG 
ATAATAGTCC CCATCTCTAT AGGCCTGATT TCAATGATTG TCGGGCGGTC CCAAAAATAT 
TTCCGCAAAC AACAGGACTA TCTGGGTCAT ATAAACGGCC ATGTGGAAGA AATGTATTCC 
GCCCACAATG TCATGAAAGC CTTTAACGGT GAGGCAAAAT CCATAGCCAA ATTCAAAGGG 
CTGAATGAAG AGCTATACAG TGCATCCTGG AAAGCCCAGT TTTTGTCCAG CATTATGATG 
CCCATGATGA ACTTCATAGG CAACCTGAGT TATGTGGTTG TATGTATTCT GGGCGGCTTT 
TTGGCCATAC AAAAAACTAT TCAGGTAGGT GACATACTGG CCTTTGTCCA GTATGTCAGG 
TCATTTACCC AGCCGCTGGC ACAAACCGCC AATATTGTAA ATGTACTCCA GTCTACAGCG 
GCAGCAGCCG AGCGTATTTT TGAATTTCTG GGAGAAGACG AGGAAGTACC CGAACCGTCT 
AACCCGGTTA GCCTGAAGGA TATTTCAGGT GCTGTCAGCT TTAAAGATGT GTCCTTTGGC 
TACAGCCCGG CTAAAACCAT AATTAAAGAT TTTAATGCGG ATATAAAACC CGGCCAGCGG 
GTAGCCATTG TAGGCCCTAC GGGTGCGGGG AAAACCACCA TGGTCAAACT GCTGATGCGC 
TTTTACGACG TAAACAGCGG GGCGATTCTG GTAGATGGGG TAAATATCCA GGATATAAAG 
AGACAGGAAT ACCGGAGTGC TTTCGGCATG GTACTTCAAG ATACCTGGCT CTTTAATGGC 
AGTATTATGG ATAATATCCG CTTCGGCAAG CTGGACGCAA CTGACGAAGA GGTTTATACC 
GCAGCCAAAA CTGCCTACGT AGATCATTTC ATACACACCC TGCCTAGCGG GTATGAAATG 
ATAATGAACG AGGAGTCCAG CAATATTTCC CAAGGTCAAA AACAGTTGCT GACCATTGCC 
AGAGCCGTTT TGGCCAACCC CAAGATTTTA ATTTTGGACG AAGCTACCAG CTCGGTAGAT 
ACCAGAACCG AAATGCTGAT ACAGCAGGCT ATGGAAAATC TGATGAAAGG CCGTACCGCA 
TTCATAATTG CCCACCGCCT GTCCACAATC CATAATGCAG ATATCATACT GGTAATGAAA 
GACGGTGCAA TTGTAGAACA GGGCAGCCAT GAAACACTGC TTGAAGCAAA CGGATTTTAT 
GCTTCGCTAT ATAACAGCCA ATTTGAAGCA GGGCCGGCAG AAGCAGACTC TTAA 

 

Protein sequence

MSQNRNTPQL RMPMGGRPMG GGMHMGGGPM GGMRMAQSGE KARNFKDTMA SLLKYLTPYR 
FPLIIALVLA IFGTVFTIIG PKLLGNATTK LFEGLVSKVT NAAGADIDFT YIGNIVLILV 
GLYVISAICS YIMGYIMTGV SIKVTYDLRK QIAEKINRLP MKFFDNKTYG EVLSHVTNDV 
DLISNTLTQS MSQMVTSIVT ILGVLVMMFT INWIMALASL IIVPISIGLI SMIVGRSQKY 
FRKQQDYLGH INGHVEEMYS AHNVMKAFNG EAKSIAKFKG LNEELYSASW KAQFLSSIMM 
PMMNFIGNLS YVVVCILGGF LAIQKTIQVG DILAFVQYVR SFTQPLAQTA NIVNVLQSTA 
AAAERIFEFL GEDEEVPEPS NPVSLKDISG AVSFKDVSFG YSPAKTIIKD FNADIKPGQR 
VAIVGPTGAG KTTMVKLLMR FYDVNSGAIL VDGVNIQDIK RQEYRSAFGM VLQDTWLFNG 
SIMDNIRFGK LDATDEEVYT AAKTAYVDHF IHTLPSGYEM IMNEESSNIS QGQKQLLTIA 
RAVLANPKIL ILDEATSSVD TRTEMLIQQA MENLMKGRTA FIIAHRLSTI HNADIILVMK 
DGAIVEQGSH ETLLEANGFY ASLYNSQFEA GPAEADS