| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1127 |
|---|
| Symbol | |
|---|
| ID | 3229541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1030971 |
|---|
| End bp | 1031741 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637120691 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_181842 |
|---|
| Protein GI | 57234075 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0070] Glutamate synthase domain 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000223973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGTA TCGAAGTGAA ACAAAACCAG GATACTGCCT GTGTAAATTT GCACGGTGTT
TATTACCGTG AGCTTAATAC CCGTTTGGCA GAGCTGGTAA ATCAGGGTGT CCGCTCTTTG
GAACTTAACA ATGCCTGCGG CCAGCGTTAT ATCGGTACCA GCCTTAAAGG TGACTTGAAA
ATAACCATAA ACGGCACACC CGGCAACGAC CTGGGGGCTT TTATGGATGG CCCCAGTATA
ACAGTAAACG GAAATGTGCA GGATTGCTGC GGCAATACTT TAAATAACGG CTGTATTGTC
GTTCACGGGC ATGGCGGGGA TATATTCGGT ATGTCTGCCC GCGGCGGCAA GCTTTTCGTG
CGTGATTATG TGGGTTACCG TGCCGGTATT CATATGAAAG CCTATCAGGA TAAAAAACCG
TCTCTGGTTA TCGGGAATAC CGCCCAGGAC TTTCTGGGGG AGTATATGGC CGGAGGTGTG
CTGGTAGTAC TGGGTTTGGG TCTTGGGGAA AATGAAACCC ACAAGGCCAA CTTTATCGGC
ACAGGCATGC ACGGCGGCGT AATATATATG AGCGGCAAGG TTGAAGAACA CCAGCTTGGC
AAAGAAGTGG CTATAGCCGA GCTGGATGAG ACCGATTGGA AAACTTTACG CCCTTTAATT
GATGAATTTG CTCTCCACTT TGGTTATAAT GCAGAGGAGA TAGCTGCCAG GCCTTTCTAC
AAGCTTTATC CGAAGTATCT CAGGCCTTAT GGCAGAATGT ACGCTTATTA A
|
|---|
| Protein sequence | MTSIEVKQNQ DTACVNLHGV YYRELNTRLA ELVNQGVRSL ELNNACGQRY IGTSLKGDLK
ITINGTPGND LGAFMDGPSI TVNGNVQDCC GNTLNNGCIV VHGHGGDIFG MSARGGKLFV
RDYVGYRAGI HMKAYQDKKP SLVIGNTAQD FLGEYMAGGV LVVLGLGLGE NETHKANFIG
TGMHGGVIYM SGKVEEHQLG KEVAIAELDE TDWKTLRPLI DEFALHFGYN AEEIAARPFY
KLYPKYLRPY GRMYAY
|
|---|
| |