Gene DET1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1055 
SymbolrecN 
ID3229635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp955485 
End bp957251 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content50% 
IMG OID637120619 
ProductDNA repair protein RecN 
Protein accessionYP_181770 
Protein GI57234168 
COG category[L] Replication, recombination and repair 
COG ID[COG0497] ATPase involved in DNA repair 
TIGRFAM ID[TIGR00634] DNA repair protein RecN 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGTTG AGCTTCGGGT AAAAAATTTC GGCATTATTG AGGATATCAC CTGGTCACCC 
GGTGAAGGTC TTAATGTCAT TACGGGTGAA ACCGGAGCCG GAAAGTCACT GGTCATAGAT
GCGGTGGAAA GCCTGCTTTC GGGGCGTATT GGTGACGAAC AAATCCGCCA CCAGGCCAGT
GAAGCCAATC TGGAGGGAGT GTTTTATTTA AACCCCGCCA GCCGCCTGAA AATAGCCGCC
ATACTGGCTG AAAACGGGCT GGAACTGGAA GATGACAGCC TTATTATCCG CCTTGAGTCA
AAACTGGCCG GCCGCAGTGT GCTAAGGTTA AACGGCAGCG CCATAAGCCG CTCGGTCTTA
AGCCGCCTCT GCCCCTATCT TATTGATATA CACGGCCAAA GTGAACACCT TTCCCTGCTT
AATAAATCTT TCCATCTGGA TATGCTGGAC GGTTATGCCC ATACTGCCGG TGAACGCACC
GAGTTTGCCC GTCTGGCAGG TGAGCTTACC TGCCTGCAAA GGCAGCTGTC CGAACTGGAA
AAGACCAACC GCGAAGCCAT CCGCCAGCAG GAGTTTCTGC GTTTTCAGGC AGATGAAATA
GAAGCGGCCA ATCTTGCCGA AGGCGAAGAG GAAAACCTGC TTTCCAAACG GCAGGTCATG
GCTTCCGCCG AAAAACTGAA AAACCTGACC CACCAGTCAC TGGAGTATCT GTGCAGCGGC
CAAAGCGGAG GGGTACTGGC AGATTTAAAC CAGGCTATGC AATCCCTCAG AAAAATTTCC
GAAATAGACG CCTCACTAAA GGAAACGGCA GACGAGGTGG AAAACGCTTA TTTCAGCCTT
GAGGAAAACT GCCGCTCAGT CCAGAACTAT AACCGGGGGC TTGATTTTAA CCCCGCGGAA
CTGGAAGATA TTGAAAACCG TCTGGCACTT ATCCACAGTC TGGAAAGGAA ATACGGGCGG
GATATCCCCC AGATACTGGC TTTTCTGGCT AAAACCAAAG CCGAACTGGA TAGCATAATC
GGCTATGCCG AAAAAACAGA TAAACTAAGC GGGGCTATCA CCGAATTAAA AAGCCGCCTC
GGAGATATGG CATCAGGATT AAGCAAACAC CGCAAAGAAG CCGCCCTTAG TCTTGAAAAA
GCAGTACAAG CCGAACTGGC GGACCTTAAC ATGGGGCAGG TAATATTTAA AGTAAATTTC
CAAACCCAGT CTGATGAAAA CGGGCTGCCG GTTGGCGGGC AGATGCTTGG CTTTACCTCA
AGCGGCACAG ACATTGTGGA ATTTTTTGTA AGCACCAACC CCGGCGAGCC TCTCCGCCCG
CTTAACAAAA TAGCCTCTAC CGGTGAAATA TCACGCATTA CTCTGGCTTT AAAAAGCGCT
GCTTCACGGC TGGACGATAT ACCGGTGATG ATATTTGATG AAATTGATAT AGGGGTGGGC
GGACGCTCCG GAGACATGCT GGGGCGGAAG CTCTGGAAGC TGTCACAAGG GCATCAGCTG
ATAAGCGTTT CCCACCTGCC CCAGATAGCC GCATATGCCG ACCATCACTT TTATGTATCA
AAAACCGAAC TTAATGGCCG GATAAACAGC CGGATTGCAC GCCTGGATAG TGAAGAACAT
CTTGCCGAAC TTTCGGTAAT GCTATCAGGC AACCAAACAG GCGAAAAATC ACTGGAAAAC
GCCCGCGAAC TCCTGAAAAA AGCTTCTTTA TTCAAGGAAA CCAGCCCCGG ACAACCCGAA
CTGAATATGC CCCCAAGCGG AAAGTAG
 
Protein sequence
MLVELRVKNF GIIEDITWSP GEGLNVITGE TGAGKSLVID AVESLLSGRI GDEQIRHQAS 
EANLEGVFYL NPASRLKIAA ILAENGLELE DDSLIIRLES KLAGRSVLRL NGSAISRSVL
SRLCPYLIDI HGQSEHLSLL NKSFHLDMLD GYAHTAGERT EFARLAGELT CLQRQLSELE
KTNREAIRQQ EFLRFQADEI EAANLAEGEE ENLLSKRQVM ASAEKLKNLT HQSLEYLCSG
QSGGVLADLN QAMQSLRKIS EIDASLKETA DEVENAYFSL EENCRSVQNY NRGLDFNPAE
LEDIENRLAL IHSLERKYGR DIPQILAFLA KTKAELDSII GYAEKTDKLS GAITELKSRL
GDMASGLSKH RKEAALSLEK AVQAELADLN MGQVIFKVNF QTQSDENGLP VGGQMLGFTS
SGTDIVEFFV STNPGEPLRP LNKIASTGEI SRITLALKSA ASRLDDIPVM IFDEIDIGVG
GRSGDMLGRK LWKLSQGHQL ISVSHLPQIA AYADHHFYVS KTELNGRINS RIARLDSEEH
LAELSVMLSG NQTGEKSLEN ARELLKKASL FKETSPGQPE LNMPPSGK