Gene DET1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1038 
SymbolileS 
ID3229669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp942098 
End bp945142 
Gene Length3045 bp 
Protein Length1014 aa 
Translation table11 
GC content51% 
IMG OID637120602 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_181754 
Protein GI57234202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.738889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAGG CTGTGAATCC CAGACAAAAC TTCCCCCAGA TGGAAGAAGA TATCCTGAAA 
CTTTGGCAGG ACAAGGGCGT ATTCAAAAAG AGCATTGAAA ACCGCCGTGA CGGCAAGCGT
TTTACCCTGT ACGAAGGGCC GCCCACTGCC AACGGCCGTC CCGGTATTCA TCATGTTCTT
TCACGGGTTT TTAAGGACGT AATACCCCGC TACAAGGTTA TGAAGGGTTA TTATGCCCCC
AGGATTGGCG GTTGGGATAC CCATGGCCTG CCGGTTGAGC TTGAGGTGGA AAAAGAGCTG
GGCTTTACCA GCAAAAATGA TATTGAAAAG TACGGCATTG CCGAGTTCAA TGCCCGTTGC
CGTTCCAGCG TTTTTAAATA TGTGTCCGAG TGGAACAAGC TGACTGAACG GATTGCCTAC
TGGGTGGATT TGGACAATGC CTATATAACT ATGGATAACA ACTATATAGA GAGCGGCTGG
TGGGCGCTTA AGCAAATGTG GGACAAGGGA TTAGTGTATC AGGGGCATAG GGTTACCCCC
CATTGCCCGC GCTGCGGCAC TTCGCTAAGC TCTCATGAGG TGGCGCAGGG ATATAAGGAT
AATACCGAAG ACCCTTCCGT ATTTGTAAAG TTTGAAATAG CCAAAGAAAG TCTGGCCAAG
GCAGGTTTGG CAAAGAAATG GGCTTACCCG GCTGACAAGC CGCTTTACCT GCTGGCCTGG
ACTACTACCC CCTGGACTTT ACCTGCCAAT ACCGCGCTGG CAGTATCCGC TGCGGACCAG
TATGCCATAC TGGATATGAC GGACTATTAT ATGATACTGG CCAAACCCCG TCTGTCAGCC
CTCAAACTGG CGGAAAACCC CGTAGCGGGG GAATGCCTGG GCAGTGACCT TAGCGGGCTT
TTTTATAAGC CGCTGTTTGA CCCGCGGGAA TTCGGTATTC CTGTAAGAAA TATGCAGGAT
AACTCTGAGA CAGGTGTTTC TGAAGAACTG CTTTATCCGG TAATCACCAC CAGCTATGTA
TCTATGGATG ACGGTACGGG TATAGTCCAT ACCGCCCCGG CTTACGGCGA ACTGGACTAT
GAATCCGGGG TGAAGTACGG GCTGAAATTT GTCCACCACG TGGATTTGCA GGGCAGGATA
ACCGGCAGTT ACCCGTTTGC CGGCAAATTT GTTAAAGAAG CTGACAAGGA TATCTCCCGC
AACCTGAAAG AGCGGGGGCT GATGTTCCGT AATGAACGTA TGCACCATAC CTATCCGTTC
TGCTGGCGGT GTGATTCCCC GCTTATTTAT TACGCCAAGC AAAGCTGGTA TATACGGACT
ACCGCGGTCA GAGACGAACT GATAAAGGGC AACCAGCAGA TAAACTGGTA TCCCGAACAT
ATAAAAGACG GCCGCTTTGG AGACTGGCTG GAAAATAATA TTGACTGGGC TTTTTCCCGC
GAGCGTTACT GGGGAACGCC TGTACCCATC TGGCGGTGTG AAAAGTGCGG CCGGACGGAG
TGTGTCGGCG GCATTGACGA ACTCAAAGCC AAGCCGAATT TTAAAGGCAT GCAGGAAAAA
CTGGATATCC ACCGCCCATA TGTAGACGAG TGGACTTATG ACTGTGATAA ATGCGGCGGG
AATATGAAAC GGGTTACCGA GGTTATGGAC TGCTGGTATG ACTCCGGGGC TATGCCGGTT
GCCCAGTACC ATTACCCCTT TGAGCCCGAA AGCAGGTCTA TTGCCAAAGA CGGGCGTTTC
CCTGCTGACT ATATCTGTGA GGCTGTAGAC CAAACACGCG GCTGGTTTTA CAGTTTGCAT
GCTATTTCTA CCCTGATATT CAACCGCCCC TGTTATCAGA ATGTAATCTG TCTGGGGCAT
ATACTGGATG AGCGCGGCGA AAAAATGAGC AAGTCCAGAA ATAATGTTAT TCAGCCGGCT
ACGGTGCTGG ATAAATACGG GGCAGACGCT GTCCGCTGGT ATTTCTATAC TGCGGCCCCT
CCCGGAAATG CCAGACGCTT TTCCGAAAAA CTGGTGGGTG AGGTAACCCG CCAGTTCCTG
CTGATGCTCT GGAACGTATA TTCATTTTTC GTTACCTACG CCAATATAGA CAGCTTTACC
CCTTCGGAAA AGTATCTGGA AGGCGAAGTG CCCGAACTGG ACAGGTGGAT TTTATCCGAG
CTTAACCAGC TGGTGCTGGA TGTAGATAAG GGGTTGGATA ATTATGACCC CACTCAGGCC
GGACGGCGGA TTGAAGATTT TGTGGGATAC CTTTCCAACT GGTATGTCCG CCGCAGCCGC
CGCCGTTTTT GGAAGAGCGA AAATGATGCT GACAAACTTT CAGCCTATCA GGCTTTGTAT
ACCTGTCTGG TTACTCTTTC CAGACTGCTG GCTCCCTTTA CCCCGTTTGT AGCCGAAGAA
CTCTACCAGA ACCTGGTGCT TTCGGCAGAC CCGTCTGCTT TGGAAAGTGT CCACCTGACG
GATTTTCCGG TGGCGGACAC AGCGCTTATA GACGAACAGC TGGATAACGA AATACGGCTG
GTGATGAAGG TTTCCAGTAT GGGGCGTTCT GCCCGAAGCA AAGCGGCTCT CAAAGTCCGC
CAGCCTCTGG CTGAGGTGCG GGTGGTACTG GCTTCCGCCG GTGAAAGAAC AGGACTTATG
CGTCTGGCCG AGCAGGTGCT GGAAGAGCTG AATGTAAAGG CTTTGGCAGT GGAAGAGCCG
GGCACAGTTA TACCGGAGAA AAACTATGCC GCAAGTACCG AAGGGGCTTA TACAGTAGCC
GTCTATACCG GACTTTCACC CGAACTGCTG GCTGAAGGCA CTGCCCGCGA GATTGTCCAC
CGTTTGCAGA CTATGCGGAA ATCTGCCGGA TTTGAGATTG CAGATTATAT AAATACTCAT
TATCAGGCTG ATGAATATCT GGATAGTGTT ATCCGGATGC ATAGCGAGTA TATAAAGAAA
GAAACACTCT CCAACCAGCT TATAAAGGGA AACGCCCCCG AAGGGGCGTA TGCTGAAAGT
CTGGATATTG ACGGCCACTC CCTAAGCCTG TGGGTGGCAC GCTAA
 
Protein sequence
MFKAVNPRQN FPQMEEDILK LWQDKGVFKK SIENRRDGKR FTLYEGPPTA NGRPGIHHVL 
SRVFKDVIPR YKVMKGYYAP RIGGWDTHGL PVELEVEKEL GFTSKNDIEK YGIAEFNARC
RSSVFKYVSE WNKLTERIAY WVDLDNAYIT MDNNYIESGW WALKQMWDKG LVYQGHRVTP
HCPRCGTSLS SHEVAQGYKD NTEDPSVFVK FEIAKESLAK AGLAKKWAYP ADKPLYLLAW
TTTPWTLPAN TALAVSAADQ YAILDMTDYY MILAKPRLSA LKLAENPVAG ECLGSDLSGL
FYKPLFDPRE FGIPVRNMQD NSETGVSEEL LYPVITTSYV SMDDGTGIVH TAPAYGELDY
ESGVKYGLKF VHHVDLQGRI TGSYPFAGKF VKEADKDISR NLKERGLMFR NERMHHTYPF
CWRCDSPLIY YAKQSWYIRT TAVRDELIKG NQQINWYPEH IKDGRFGDWL ENNIDWAFSR
ERYWGTPVPI WRCEKCGRTE CVGGIDELKA KPNFKGMQEK LDIHRPYVDE WTYDCDKCGG
NMKRVTEVMD CWYDSGAMPV AQYHYPFEPE SRSIAKDGRF PADYICEAVD QTRGWFYSLH
AISTLIFNRP CYQNVICLGH ILDERGEKMS KSRNNVIQPA TVLDKYGADA VRWYFYTAAP
PGNARRFSEK LVGEVTRQFL LMLWNVYSFF VTYANIDSFT PSEKYLEGEV PELDRWILSE
LNQLVLDVDK GLDNYDPTQA GRRIEDFVGY LSNWYVRRSR RRFWKSENDA DKLSAYQALY
TCLVTLSRLL APFTPFVAEE LYQNLVLSAD PSALESVHLT DFPVADTALI DEQLDNEIRL
VMKVSSMGRS ARSKAALKVR QPLAEVRVVL ASAGERTGLM RLAEQVLEEL NVKALAVEEP
GTVIPEKNYA ASTEGAYTVA VYTGLSPELL AEGTAREIVH RLQTMRKSAG FEIADYINTH
YQADEYLDSV IRMHSEYIKK ETLSNQLIKG NAPEGAYAES LDIDGHSLSL WVAR