| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1025 |
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| Symbol | rnc |
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| ID | 3229696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 931014 |
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| End bp | 931727 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637120589 |
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| Product | ribonuclease III |
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| Protein accession | YP_181741 |
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| Protein GI | 57234229 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00427221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGATT TAACTGAACT TGAAAAATCC CTGGGAGTAA AGTTTGAAAA TCTGTCCCTT
TTGGAGCAGG CGCTCATACA TACTTCATGG GTAAACGAAA ACCCAAACCA CTTAAGCGGC
TCTAACGAAA GAATGGAATT TCTGGGTGAT GCCGTACTGG GTGTAATATT TGCAGACCGG
CTTTACCATG ATTTCCCTGA TATTCAGGAA GGTGACCTGA CCCGTTTCCG TTCCCTGCTG
GTGCGGCGGG AAAGTCTGGT AAGAGTAGCT TTGGGCATCA ATCTTGGCAA ATACCTCTAT
CTGGGGCGGG GTGAAGATGC CTCCAAGGGG CGTTTTAAGC CGGCCAATCT GGCGGGTGCA
TTTGAAGCCG TGCTGGCAGC CATATATCTG GATAAAGGGA TAGATGCAAC CAGGGAAGTT
ATCTTCCGCC TTTTTAAGAC CGAAATGGAA CGGGTGCAAA CCCTGAGTTC CAACATTGAT
TACAAATCAC GCCTGCAGGA GCTTGTGCAA GCCCAATTTC AGCTTACACC CCGCTACCGT
ATTATAGATT TCAGCGGGCC GGAACATAAC CATCTGTTTA TAGCCGAAGT CTATACCGAA
GACAAAGTGC TGGCGGAAGG TTCGGGGCGC AGCAAAAAAG AAGCCGAAAC CAGCGCCGCT
AAAGAAGCCT TGCAGCAGTT TGAAAACAGC TTTACAGCCG AAGATAACAT TTGA
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| Protein sequence | MLDLTELEKS LGVKFENLSL LEQALIHTSW VNENPNHLSG SNERMEFLGD AVLGVIFADR
LYHDFPDIQE GDLTRFRSLL VRRESLVRVA LGINLGKYLY LGRGEDASKG RFKPANLAGA
FEAVLAAIYL DKGIDATREV IFRLFKTEME RVQTLSSNID YKSRLQELVQ AQFQLTPRYR
IIDFSGPEHN HLFIAEVYTE DKVLAEGSGR SKKEAETSAA KEALQQFENS FTAEDNI
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