Gene DET0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0953 
Symbol 
ID3229710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp872945 
End bp875431 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content50% 
IMG OID637120517 
Productcopper-translocating P-type ATPase 
Protein accessionYP_181678 
Protein GI57234243 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase
[COG2608] Copper chaperone 
TIGRFAM ID[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA AGAACCTGCC GGATACTTTG CCAAAGATAA TCATGGGTAT AAGCGGTATG 
TCATGTACCA GATGCGCCGC CAGTATAGAA GCGCGTTTGT CAAAAACAGA CGGGATAACA
GACCCCAAAC TGAATTTTGC CTCCGCCAAA CTTATATTCA GCTATGACCC GGCCGTTATC
AGCCTGGCAG ATATTAAATC TATTATTTCG GGCTTGGGTT ACGGCGTTAT CAGCCGCAAA
TCCATTTTCC CCATAAAGGG CCTCCACTGT GCTTCCTGCG TAGCCAGAGC CGAAAAAGCC
CTGAAGAACA CAAACGGGGT TCTCAGTGCC AGTGTAAACC TGGCTAATCA GACTGCCAAT
GTGGAGTATC TGGATTTTAT TTCCTACCGT GAACTCAGCC AAGCCATAAA AAACACCGGC
TACGAACTGC TGTCGGAAGA AACACCCCAA AACGAGCTTA ACAGCTCGGA AAATGCCGAA
ACCCGCAAAC TGCAACAGGA ACTTACAGTT GCTCTGGTGC TGGGAATAAG CCTTATGATT
ATAGGATTCC TGCCAGCCTT TGGCGGCAAG GAATTTATTA TGTTCTTGCT GGCTACGCCC
GTGCAGTTCT GGGCTGGGCT GCGTTTTTAC CGCGGGGCAT TTGCCGCCCT GAAAAACCGC
ACCTCGGACA TGAATACTCT TATCGCCCTG GGTACTTCTG CAGCTTACCT GTACAGCCTG
ACTGCTTTGG TATTCCCCTC AATATTTGAT TCACCGCTGC TGGAAAAGCA CCTTTACTTT
GATACCTCCG CCATGATTAT CGCCCTTATC CTGACCGGGC GTTTTCTGGA AGCCCGTGCC
AAAGGGCGCA CCTCTGATGC CATCCGCCGT CTGGTCGGCC TTCAGCCAAG TACCGCTTCA
ATTATCCGGG ACGGCAAGGA AATACTGGTG GGCATCAGCG AAGTGGTGGC TGGAGATAAA
ATTGTTATCC GTCCGGGGGA ACGGCTGCCG GTTGACGGGC TGATATTGGA AGGCTATTCC
AGCCTGGACG AATCTATGGT AACCGGAGAG AGTATACCGG CTGAAAAAAA AGCCGGGGAT
TATGTTATCG GCGGTACGTT TAATCAAACC GGCGCATTTA CTTACGAAGC TCAAAAAGTA
GGGGCGGATA CCGCCCTGGC CAGGATAATC CGGCTGGTTG AGGAAGCTCA GGGAAGCAAA
GCCCCTATCC AGCGTCTGGC GGACAAAATA GCCTCGGTAT TTGTACCGGC GGTTATCAGT
ATAGCCATAC TGACCTTTGT GTTCTGGCTG GTATTCGGGC CAGAGCCATC TTTTACCTAT
GCCGCTTTAA ATATGATAGC CGTACTTGTT ATTGCCTGCC CGTGTGCTTT GGGGCTGGCC
ACACCCACCG CTTTAATTGT GGGTATGGGC AAAGGGGCTG AAAACGGAAT ACTTATCCGC
AGTGCGGTGG CACTGGAGAA AATGCATAAA CTGGATACAA TTGTACTGGA TAAAACGGGT
ACTCTTACCC GCGGCAAACC GGTGCTAAGC AATCTGGTAA GCCATACCAT GGATAAAGAT
TCCTTCTTAA CCCTGGTAGC CTCTGCCGAA CAGTTTTCCG AACACCCTCT GGCCAAAGCA
GTGGTAAAAG AGGCTGCGCG CAAAAAACTA AAGATTACCT CCTCGTCAGA GTTTTCCGCC
CTGCCCGGTG CGGGGTTAAA AGCCACTGTT AGCGGCAAAC AAATACTCAT CGGCAACGCA
AACCTGATGC AGTCAAACCG GATATCCCTT GCTGAATACC AATCTGAGGC TGACAAGCTC
TGGGAAGCCG GGGAAAACCT TATTTTCGTG GCAGCGGACG GCAAACTTGA GGGTATGGTG
GCGGTACGGG ATATATTAAA ACGCGAATCC CAGGCGGTGG TAGCCGAACT CAAGGCAAAT
AAACTCCGCA CTATTATGCT CACCGGTGAC AACCAGAGGG CAGCCAAACG CATTGCAGAC
GAACTTGGCT TGGACCAGTA TATATCTGAG GTAAAGCCTG AAGACAAATC AAGGCTGGTA
CAGGAACTGC AAGACCAAGG TCACTTTGTA GCTATGGTGG GAGACGGTAT AAATGATGCC
CCGGCACTGG CAAAGGCAGA CGTAGGCATA GCCATAGGCA CCGGCACTGA TATAGCTATG
GAAACCGGTG ATATCACCCT TATCTCAGGT GATTTATTCG GTCTTACCAA AGCTATCGTC
CTTAGCAAGG CAACTTTTAA TACTATCCGC CAAAATCTTT TCTGGGCTTT TTTCTACAAT
ATTATCCTGA TACCCGTGGC AGCCGGGGTA CTCTACCTGT TTTTAAGCCA CAGCGGTGTC
CCCCAATCCC TTCATTTCTT CCTGGGAGAA TACGGATTTT TAAACCCCAT ACTGGCAGCT
CTGGCCATGG CCGTCAGCTC TCTGACTGTA GTCAGCAATT CCCTCCGCCT GCGCAGGGTA
AAACTAAATA CTTATCTAAA GCAATAA
 
Protein sequence
MPEKNLPDTL PKIIMGISGM SCTRCAASIE ARLSKTDGIT DPKLNFASAK LIFSYDPAVI 
SLADIKSIIS GLGYGVISRK SIFPIKGLHC ASCVARAEKA LKNTNGVLSA SVNLANQTAN
VEYLDFISYR ELSQAIKNTG YELLSEETPQ NELNSSENAE TRKLQQELTV ALVLGISLMI
IGFLPAFGGK EFIMFLLATP VQFWAGLRFY RGAFAALKNR TSDMNTLIAL GTSAAYLYSL
TALVFPSIFD SPLLEKHLYF DTSAMIIALI LTGRFLEARA KGRTSDAIRR LVGLQPSTAS
IIRDGKEILV GISEVVAGDK IVIRPGERLP VDGLILEGYS SLDESMVTGE SIPAEKKAGD
YVIGGTFNQT GAFTYEAQKV GADTALARII RLVEEAQGSK APIQRLADKI ASVFVPAVIS
IAILTFVFWL VFGPEPSFTY AALNMIAVLV IACPCALGLA TPTALIVGMG KGAENGILIR
SAVALEKMHK LDTIVLDKTG TLTRGKPVLS NLVSHTMDKD SFLTLVASAE QFSEHPLAKA
VVKEAARKKL KITSSSEFSA LPGAGLKATV SGKQILIGNA NLMQSNRISL AEYQSEADKL
WEAGENLIFV AADGKLEGMV AVRDILKRES QAVVAELKAN KLRTIMLTGD NQRAAKRIAD
ELGLDQYISE VKPEDKSRLV QELQDQGHFV AMVGDGINDA PALAKADVGI AIGTGTDIAM
ETGDITLISG DLFGLTKAIV LSKATFNTIR QNLFWAFFYN IILIPVAAGV LYLFLSHSGV
PQSLHFFLGE YGFLNPILAA LAMAVSSLTV VSNSLRLRRV KLNTYLKQ