Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0936 |
Symbol | cobQ |
ID | 3229753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 857033 |
End bp | 858553 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120500 |
Product | cobyric acid synthase CobQ |
Protein accession | YP_181661 |
Protein GI | 57234286 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.164528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCA TGGCGAAATT GATAATGGTT CAGGGCACTT CTTCTAATGT GGGCAAGAGC ATACTGGTCA CTGCGCTCTG CCGGATATTC AAACAGGACG GCTACAAAGT AGCCCCGTTC AAGTCCCAAA ATATGGCGCT GAACGCTTTT GTCACCCAAG AGGGCGGTGA AATCGGCCGG GCACAGGCTG TTCAGGCAGA AGCCTGCGGC ATTGCCCCCA GTGTAGATAT GAACCCTATT CTGATGAAGC CCGAAGCAGA TTCCAAAAGC CAGATTGTTG TAAACGGCAA AGTGGACCGC ACCATTTCTG CCCGTGAATA TTATGAATAT GCACCCCTGC TGCTGGATAC CGCTCTGGCG GCACTTAACC GTCTGCGGGA GCAAAATGAT ATTGTGGTCA TAGAAGGGGC AGGCAGCCCG GCTGAGATAA ACCTGAGGCA GCGGGAGATT GTAAATATGC GGATTGCCAA AACCGCCGGT GCGCCGGTGC TTCTGGCCGG AGACATAGAC CGGGGCGGCG TTTTTGCTTC TTTGATTGGC ACTATAGACC TTTTAGAGCC TGAAGAACGC AGTTATGTAA AGGGCTATCT GATAAATAAA TTCCGGGGGG ATGCCAGTTT ACTTAAACCA GCCATAGATG TACTGGAAGA CCGCACCTCC ATACCGGTAC TGGGCATTAT CCCCTATCTG CGGAATATGG CCATTGCCCA GGAAGATTCG GTATACCTGG ACGAATGTAA AAGCGGTCTG GGTGAAACCG ACCTTGATAT TGCGGTAATA CGTCTGCCCC GCATATCCAA CTACGACGAT TTTGACGCTT TAGCCACAGA CGGGGCATCA GTCAGGTTTG TATCTAAAAC CGGTGAGATT GGCAACCCTG ATTTGATAAT AATTCCGGGT ACCAAATCCA CCATACCTGA CATGGAATAT CTGTGGCAAA ACGGTCTGGC GGAAACTATC ATCAAAAAAG CCGGAAAAGG CACCCATGTT TTAGGCGTCT GCGGCGGCTA TCAGATTTTG GGAAAGATGA TATACGACCC CCACAAGACT GAGTCTGAAA CCACCGAATT AAAGGGTCTG GGTTTGCTGG ATACCGAAAC AACCTTTGAA AAAGAAAAAT CCACCACACA GGTAAGCGGC CAGGTCAGGT TTAATAACGG GCTGCTTGCA GATATGGCCG GTTGTGAAGT GGGCGGCTAT GAAATCCACA TGGGAAGGAC CCGCTTATTT ACTGCCCAGC CTGCCTTCCA GATTACCAAA ACCCCCAAAG GCCCGGCTGA TTATCTGGAC GGGGCATCCA ATGCCGAAGG TACGGTGCTG GGTACATATA TACACGGAAT ATTTGAAAGT GACTCTTTCC GCCGCGGCTT CTTAAATGCA ATCCGCCGTT ACAAGGGCAT CCCTGAGCGG CAGGCAGGCT ATTTTGACCG TGACAAAGAA TATGATAAAC TGGCAGATAT AGTCAGGGCA AGCATAGACA TGAACAAGAT TTATGATATT TTGAACGAGG GAATAAGATG A
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Protein sequence | MNAMAKLIMV QGTSSNVGKS ILVTALCRIF KQDGYKVAPF KSQNMALNAF VTQEGGEIGR AQAVQAEACG IAPSVDMNPI LMKPEADSKS QIVVNGKVDR TISAREYYEY APLLLDTALA ALNRLREQND IVVIEGAGSP AEINLRQREI VNMRIAKTAG APVLLAGDID RGGVFASLIG TIDLLEPEER SYVKGYLINK FRGDASLLKP AIDVLEDRTS IPVLGIIPYL RNMAIAQEDS VYLDECKSGL GETDLDIAVI RLPRISNYDD FDALATDGAS VRFVSKTGEI GNPDLIIIPG TKSTIPDMEY LWQNGLAETI IKKAGKGTHV LGVCGGYQIL GKMIYDPHKT ESETTELKGL GLLDTETTFE KEKSTTQVSG QVRFNNGLLA DMAGCEVGGY EIHMGRTRLF TAQPAFQITK TPKGPADYLD GASNAEGTVL GTYIHGIFES DSFRRGFLNA IRRYKGIPER QAGYFDRDKE YDKLADIVRA SIDMNKIYDI LNEGIR
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