Gene DET0859 details

Gene Information

• Locus tag: DET0859
• Symbol: lepA
• ID: 3229829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 785976
• End bp: 787793
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637120423
• Product: GTP-binding protein LepA
• Protein accession: YP_181585
• Protein GI: 57234362
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0481] Membrane GTPase LepA
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01393] GTP-binding protein LepA

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00045747
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAAT CCGCTACAAG AAATTTCTGC ATTATTGCCC ACATAGATCA CGGCAAATCC 
ACTCTGGCTG ACCGCCTGAT AGAAATGACG GGTACACTCC GGCATGATGA AATGTGCGAA 
CAGGTCATGG ACAGCATGGA GCTGGAACGT GAGCGCGGCA TAACCATAAA AGCCAAGGCT 
ATCCGCCTGC GCTATCTGTC AAAGGATAGC CATGAATACC GCCTGAACCT TATAGATACT 
CCCGGACACG TGGATTTTTC CTATGAAGTT TCACGGACTA TTGCCGCCTG CGAAGGGGCT 
ATTCTGGTTA TAGATGCAAC TCAGGGTATT CAGGCCCAGA CTCTAGCCAA TGTTTACCTG 
GCCATAGAGT ACAACCTGGA AATTATTCCG GTTATCAATA AGATAGACCT GCCAGGGGCT 
GATATTCCGC GGGTAATGGG CGAAATTAAA AGCGTACTGG GTTATGACGA AGATGCCGTA 
ATTCAGATAA GTGCCAAACT GGGTTTGGGC GTGCCGGAAC TGCTGGAAGC TATCGTAGCC 
AGAGTGCCTG CCCCCAAGGG TGATGGCAAG CTGCCCCTGC GGGCGCTTAT ATTTGATTCG 
CATTATGACC CTTATAAGGG TGTGGTTGCC TACCTGCGGG TGGCAGACGG GAATATAAAC 
AAGGGTGATG ATTTACGCCT GATGGGACAG GGTACGGAAT TCAAGGTGCT TGAAGCCGGG 
TATTTTGCCC CTGCCCAGGT TGCCGCTTTG AGGTTAGACG TAGGTGATGT AGGCTATGTA 
GCCACTGGAC TTAAGTCTGT GGGCGAATGC CGGGTGGGTG ATACAGTTAC TTTGCAGCAC 
GGGGGTGCAA TCCAGCCGCT TATAGGTTAT CACCCGGCCA AGGCCATGGT TTTTGCCGGT 
ATTTATCCCA CTCAGACAGA TGATTATCAC GAACTGCGTG AGGCTATGGA AAAGCTGAGT 
CTGAATGATG CCTCGCTGTC TTATGAACCA GAATCCAGCC CGCTTTTAGG GCATGGTTTC 
CGCTGCGGTT TTTTGGGGCT GCTCCATCTG GATATAATTG TAGAACGGCT GGAACGTGAG 
TTTAACCTTT CACTGGTAGT CACCTCCCCC GGTGTCAGCC TGACAGTCAC CCGTACCAGC 
GGTGAGGTTC TTACAGTCGT AAACCCTAAC GAGATGCCCC TTCCCCACGA GATTGCCAGT 
ATTGAAGAGC CGTGGGTTTC GGTAGTGATT ATAACGCCCT CAAAATATAT CGGTACGGTT 
ATGGATTTGG TCCGGGAAAA TTACGGCGTA TATAAAAATA CCGAGTATCT GGGGCAGCTG 
GCTATGAGTG AGCTTGGACA GCGGGTACAG CTTCATTATG ATATGCCGCT TCGTTCCATA 
CTCACCACCT TTCATGACCA GCTTAAGAGC CGGACTCAGG GTTATGCTTC ACTGGACTAC 
GAATTTGTTG GTTACCGCAT TGCCAACCTT TCAAAGATAG ACGTACTGGT AAATGATGTT 
GCGGTAGATG CTTTCAGCCG CATTATTCCT CCGGATAAAG CCCATGAAAT TGGTGAGGCG 
CTTGTAAAGA AGCTGAAGGA AATGATACCC CGGCAGCTAT ATCAGGTCAC CCTTCAGGCG 
GCTATCGGCA GCAAGATTGT GGCCCGGGCT GATATATCCG CCAAGCGCAA AGACGTAATT 
GCCAAATGTT ACGGCGGTGA TATTACCCGT AAGCGCAAAC TTCTGGATAA GCAGAAGGAA 
GGCAAGAAGA AAATGCGCCA GATTGGCAAA GTGGAAGTGC CCAAAGAAGC ATTTCTAAGT 
GTTTTAAAGC TCCAATAG 

 

Protein sequence

MSQSATRNFC IIAHIDHGKS TLADRLIEMT GTLRHDEMCE QVMDSMELER ERGITIKAKA 
IRLRYLSKDS HEYRLNLIDT PGHVDFSYEV SRTIAACEGA ILVIDATQGI QAQTLANVYL 
AIEYNLEIIP VINKIDLPGA DIPRVMGEIK SVLGYDEDAV IQISAKLGLG VPELLEAIVA 
RVPAPKGDGK LPLRALIFDS HYDPYKGVVA YLRVADGNIN KGDDLRLMGQ GTEFKVLEAG 
YFAPAQVAAL RLDVGDVGYV ATGLKSVGEC RVGDTVTLQH GGAIQPLIGY HPAKAMVFAG 
IYPTQTDDYH ELREAMEKLS LNDASLSYEP ESSPLLGHGF RCGFLGLLHL DIIVERLERE 
FNLSLVVTSP GVSLTVTRTS GEVLTVVNPN EMPLPHEIAS IEEPWVSVVI ITPSKYIGTV 
MDLVRENYGV YKNTEYLGQL AMSELGQRVQ LHYDMPLRSI LTTFHDQLKS RTQGYASLDY 
EFVGYRIANL SKIDVLVNDV AVDAFSRIIP PDKAHEIGEA LVKKLKEMIP RQLYQVTLQA 
AIGSKIVARA DISAKRKDVI AKCYGGDITR KRKLLDKQKE GKKKMRQIGK VEVPKEAFLS 
VLKLQ