Gene DET0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0782 
Symbol 
ID3229882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp718823 
End bp719881 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID637120346 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_181514 
Protein GI57234415 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAATC TTGATAAACT GTGGCGGATA GTTGATGTCA ACCAGAACCG CTTAAGCGAA 
GGTTTACGGA TACTGGAAGA GATTGCCCGT TTGTACCTTG AAGATGAAAC GCTGACTTCG
CGTTTAAAAA ACCTGCGTCA CTCACTTACT TTACAGGATA TCACCTCTAA TTCCCGCCTT
TTATTTTCCC GCCAGGCGGA TACGGATATC GGCGCTCAGT TAGAAACAGC TGACCAGTCC
AAACCGGAAA CCTTATTTTC GGTTGTAAGT GCCAATGCCA AGCGGGCAGA ACAATCCCTG
CGTGTTTTAG AAGAGTTTGC CGGTTTATCT GAGACGGGTC TTGATGCCGC TCTCTACAGC
CGCGGGCGTT TTGAACTTTA TACCCTTGAA AAAGACCTGG CGGCCAGGCT TTTGCGTAAA
CACCGCCGGG ATATGATAAC GGGGTTGTAT GTGGCTATAG ATGCAGATTA TCTGGCCGGG
CGGGATATAC CTGCAGTTAC CAGAGAAGCC CTTGAAGGCG GTTGCCGCCT TATCCAGCTT
AGGGCTAAAA CGGCCTCTAC CCGAAAGTTT CTGGCACTGG CCGTAAACTT GAAGGAAATT
TGCCTTGAAT ACGGTGCGCT TTTTATTGTA AATGACCGCC TGGATATTGC CCTAGCCTGC
GGTGCGGACG GGCTTCATCT GGGGCAGACA GATATGCCGC TTTCGCAAGC CCGCCGCTTT
CTGCCGCCGG ATAGCATTAT AGGTATTTCT GCAGATACGC CCGAACAGGC TGTTTCAGCT
CAAAACGAAG GGGCGGACTA TGTGGCGGCC GGGGCGGTTT TTCCCACCCA AACTAAACCA
GATGTCCTTT TCGGCGGTCT TTCAGGTTTA AAGGCCATTC ACCAGGTGGT AAAAATACCT
CTGGTGGCTA TTGGCGGCAT AAACAAGTCA AATTTTTATG AAGCCATGCA GGCAGGTGCG
GACAGCCTCT GTCTGATAAG TGCGGTCTTA GGTGCGCCTG ATATTAAAAA GGCTACTTCA
GAATTTATAA CCCTTATGGA GGCAGCAAAA ATTGACTAG
 
Protein sequence
MDNLDKLWRI VDVNQNRLSE GLRILEEIAR LYLEDETLTS RLKNLRHSLT LQDITSNSRL 
LFSRQADTDI GAQLETADQS KPETLFSVVS ANAKRAEQSL RVLEEFAGLS ETGLDAALYS
RGRFELYTLE KDLAARLLRK HRRDMITGLY VAIDADYLAG RDIPAVTREA LEGGCRLIQL
RAKTASTRKF LALAVNLKEI CLEYGALFIV NDRLDIALAC GADGLHLGQT DMPLSQARRF
LPPDSIIGIS ADTPEQAVSA QNEGADYVAA GAVFPTQTKP DVLFGGLSGL KAIHQVVKIP
LVAIGGINKS NFYEAMQAGA DSLCLISAVL GAPDIKKATS EFITLMEAAK ID