Gene DET0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0739 
Symbol 
ID3229960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp680145 
End bp681311 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content50% 
IMG OID637120303 
ProductLL-diaminopimelate aminotransferase 
Protein accessionYP_181474 
Protein GI57234493 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID[TIGR03540] LL-diaminopimelate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGT CTAAACGGAT TGAAAATCTG CCGCCGTATC TTTTTGTCCA GATAAGCAAA 
AAGATAGCTG AGAAACGCGC TAAAGGCGAA GAGGTAATCA GTTTCGCTAT TGGCGACCCT 
GATTTACCGA CGCCCAAACA TATACTGGCG GAACTTTGCA AAGCGGCTGA AGACCCGGCT 
AATCACCGCT ATCCCGAAAC CGAAGGATTG CCGGTGTTGC GTAAGGCTAT GGCAGAGTGG 
TATGAAAAAC GGTTCGGGGT AAAACTAAAC CCTGATACCG AGGTATTGCC TCTTATAGGG 
TCAAAAGAGG GCATAGGGCA CGCTGCCTGG TGCTTTCTTG ATCCCGGTGA TGTTGCACTG 
GTGCCAGACC CGGCCTATCC GGTATATGCC ATCAGCAGCC AGCTGGCAGG CGCAGAGGTA 
TTTTATATGC CGCTGAACAA AGAAAACAAC TTCCTGCCGG ACTTTAACGC CATACCGCAA 
GATGTACTTT CTAAAGCCAA AATTCTCTGG ATAAACTATC CCAACAATCC CACCGGTGCA 
GTGGCAGGCT TGGACTTTTT TAAGGAAGCA GCGGAATTTG CCGCTAAACA CAATCTGGCA 
GTCTGCCATG ACGGACCGTA CTCTGAAATA GCTTTTGACG GCTACAGACC TGTAAGTTTT 
CTTGAAGCTG ATGGTGCCAA AGAGGTAGGG ATAGAGTTTC ATTCTCTTTC CAAAAGCTAC 
AATATGACCG GCTGGAGGAT TGGCATGGCC GTTGGCAATG CCAAAATGAT AGACGCCCTG 
CGGCGGTTTA AATCCAACCT TGACTCAGGT ATTCCTCAGG CTATCCAGCT GATGGCAATA 
GCGGCTTTGA ACGGCTCCCA AGATGTGATT AGCCAGAACT GCGCCGTATA TCAGCGCCGC 
CGTGACCGCC TGGTGGAAGC CCTGCGCAAC ATCGGTATGG AGGTTACAGC CCCAAAAGCC 
AGTTTATATA TCTGGGCACC TGTACCCGAA GGCTATACTT CAGCCAGCTT TGCTACTGAA 
CTTCTGGATA AAACCGGTGT TGTAGTTACA CCAGGTACGG GGTATGGCAC ATCCGGCGAA 
GGGTACATAA GGTTATCACT GACCGTACCT GACGAACAAC TGGAAAAAGG CATTGCCAAG 
CTTGCCAACT TCAAGAGCCA AGCATAG
 
Protein sequence
MKLSKRIENL PPYLFVQISK KIAEKRAKGE EVISFAIGDP DLPTPKHILA ELCKAAEDPA 
NHRYPETEGL PVLRKAMAEW YEKRFGVKLN PDTEVLPLIG SKEGIGHAAW CFLDPGDVAL 
VPDPAYPVYA ISSQLAGAEV FYMPLNKENN FLPDFNAIPQ DVLSKAKILW INYPNNPTGA 
VAGLDFFKEA AEFAAKHNLA VCHDGPYSEI AFDGYRPVSF LEADGAKEVG IEFHSLSKSY 
NMTGWRIGMA VGNAKMIDAL RRFKSNLDSG IPQAIQLMAI AALNGSQDVI SQNCAVYQRR 
RDRLVEALRN IGMEVTAPKA SLYIWAPVPE GYTSASFATE LLDKTGVVVT PGTGYGTSGE 
GYIRLSLTVP DEQLEKGIAK LANFKSQA