Gene DET0729 details

Gene Information

• Locus tag: DET0729
• ID: 3229973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 671735
• End bp: 673606
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637120293
• Product: [Fe] hydrogenase, HymB subunit, putative
• Protein accession: YP_181467
• Protein GI: 57234506
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; [COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; [COG3411] Ferredoxin

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAATA CAGCAATTAA AAAGTTTAAC AGTGTAGCCG AACTTGAGGC CAAACGGCAG 
GAAATCCTTA AAGACAGGAA TTCCCAAAAG ACGGTTATTG CTATTTGCTG CGGTACCGGC 
TGCCAGGCTT ACGGGGCTAA AAAAGTTGCC GATGCCTTTG AGGAAGAGCT TTCCAAAGCC 
GGTTTGGGAG ATAAGGTTGA GGTCAGAACT ACTGGCTGTC ACGGCTTTTG CGAACGCGGC 
CCGCTGGTAG TTATCCGCCC CCAGAATATT TTTTATCAGC GCCTGAAGAT TTCAGATATA 
CCAGAAATCA TTGAAAAAAC CATAAAAAAC AATGAAGTTA TTGAACGCCT GCTGTATGTT 
GACCCCATGA CCAAAGACAA AAAGGTGCAT GAACATGATG TGCCTTTCTA TAAAAAACAG 
ATGCGTCTGG TTTTCGGCAA CAACGGCAAT ATAGACCCTA CCTCTATAGA TGACTATCTG 
GCGGTGGGCG GCTATAAATC CTTGGCCAAG GCTATATCTG GCCTGAAGCC GGAAGAAATT 
GTGGAAGAGG TTATCAAATC CGGACTGCGC GGACGGGGCG GCGGCGGTTT CCCCACCGGC 
TGGAAATGGA AGTCCTGCCG GGACGCCCAT GACCCGGTAA AATATGTAAT CTGCAACTGT 
GACGAGGGTG ACCCGGGTGC GTTTATGGAC CGCTCACTTA TGGAGGGCAA TCCCCATAGC 
GTTATAGAAG GCATGATTAT CGGTGCTTAT GCTATTGGCT CTCATGAAGC TTATATTTAT 
ATCCGTGATG AATATCCTAT GGCTGTAAAG CACGCCCTTT TGGCTATAAA ACAGGCCGAA 
GACTATGGTC TGCTGGGTGA AAACATACTG GGCAGCGGCT TTGACCTGAA AATCCATATC 
AACCGGGGTG GCGGTGCCTT TGTCTGCGGT GAGTCCACGG CCCTTATGGC CTCTCTGGAG 
GGCAAGGTCG GCGAACCCCG TGCCAAGTAT GTTCATACCT CTGAAAAGGG TCTGCATGAC 
AAGCCTACCA CCCTGAATAA TGTGGAAACC TGGGCTAATA TACCCCTGAT TATAGAAAAA 
GGAGCAGACT GGTTTAACAA AATAGGTACA GAGGGCAGCA AGGGAACCAA GATATTCTCA 
CTGGTGGGTA AGGTAAACAA TACCGGCCTG ATTGAGGTTC CCATGGGTAT TACCCTTCGG 
GAAATTGTAT ATGATATAGG CGGCGGCATT CCCAAAGGCA AAAAATTCAA GGCTATTCAG 
ACCGGCGGCC CTTCAGGCGG CTGTCTGCCC GAAAGTATGC TGGATTTGCC GGTAGACTTT 
GATGAACTTA CCAAGGCCGG TTCTATGATG GGTTCGGGTG CCATGATTGT TATGGACGAA 
GATAACTGCA TGGTGGAGAT TGCCCGTTAC TTCCTGAGCT TCCTTGAAGG AGAATCCTGC 
GGCAAATGTG TACCCTGCCG TGAGGGTGTC AAGCGTATGC GCCAGATTCT GGAAAGAATA 
ACCAAGGGCG AAGGCGAAGA GGGAGATATA GAGCTTCTGG AGCAGCTTTC ACAAGCGATA 
CAGGACGCTT CTTTATGTGC TTTGGGCGGC AGTGCTCCTA ATCCGGTTTT ATCTACCATT 
AAATACTTCC GTGATGAGTA CGAAGCCCAT ATCCGCCAGA AGACCTGTCC GGCTAAGGAA 
TGTAAAGCCC TTATAACTTA TAACATCATT GATGCCAATT GCCCCGGCTG CGGTTTATGT 
TACAAAGCCT GTCCGACAGG GGCTATTATT TCACAGGGTA AAAAGATGCC GGTCATACTT 
GACCAGAGCA AATGTACTAA ATGCGGTGCG TGTTTTGATG CTTGTAAGCT CCACGCCGTA 
GAAATCAGAT AA 

 

Protein sequence

MINTAIKKFN SVAELEAKRQ EILKDRNSQK TVIAICCGTG CQAYGAKKVA DAFEEELSKA 
GLGDKVEVRT TGCHGFCERG PLVVIRPQNI FYQRLKISDI PEIIEKTIKN NEVIERLLYV 
DPMTKDKKVH EHDVPFYKKQ MRLVFGNNGN IDPTSIDDYL AVGGYKSLAK AISGLKPEEI 
VEEVIKSGLR GRGGGGFPTG WKWKSCRDAH DPVKYVICNC DEGDPGAFMD RSLMEGNPHS 
VIEGMIIGAY AIGSHEAYIY IRDEYPMAVK HALLAIKQAE DYGLLGENIL GSGFDLKIHI 
NRGGGAFVCG ESTALMASLE GKVGEPRAKY VHTSEKGLHD KPTTLNNVET WANIPLIIEK 
GADWFNKIGT EGSKGTKIFS LVGKVNNTGL IEVPMGITLR EIVYDIGGGI PKGKKFKAIQ 
TGGPSGGCLP ESMLDLPVDF DELTKAGSMM GSGAMIVMDE DNCMVEIARY FLSFLEGESC 
GKCVPCREGV KRMRQILERI TKGEGEEGDI ELLEQLSQAI QDASLCALGG SAPNPVLSTI 
KYFRDEYEAH IRQKTCPAKE CKALITYNII DANCPGCGLC YKACPTGAII SQGKKMPVIL 
DQSKCTKCGA CFDACKLHAV EIR