Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0631 |
Symbol | |
ID | 3230003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 585345 |
End bp | 586217 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637120196 |
Product | cation ABC transporter, periplasmc-binding protein |
Protein accession | YP_181373 |
Protein GI | 57234535 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAA GGACATTATT TTTGAGTTTG GCTTTAGGCG TTACCCTGCT TAGCAGTTTA CTGCTGGCGG GTTGTCAGGA AGATTCATCT TCTGCTGCCA AGCTCAAAAT TGCAGTCAGT ATAGTGCCCC TGAAAGAATT TACCCAGCAA ATTGCCGGGG ATAAGGCTGA AGTAATTCTT ATGGTTCCTC CCGGGGCGGA GCCGCATACC TACCAGCCGC TTCCTTCCCA AATGGTAGAT ATAAGCCAGG CAGATATGTA CGTGAAGCTG GGCTCTGATT TTGGTTTTGA GCAAACCTGG ATTTCAAAAA TATTGGCTTT AAACCACTCT ATGCTGATGG TAGATAGTTC GGTAAATATT ACACTGGAAA GCAGTTCGGA AGGTGACGGG GCAGACCCGC ATATCTGGCT TTCACCGCGT AATGCTATCC AGATGGTCAA AAATATCACT ACGGGGCTGA TGAGCCTGGA CCCGGAAAAC AAGAGCTATT ATGTAGCCAA CCGGGATGCT TATTTAGCAA AGCTTGAGCA GTTGGATAAT GAAATAACCC TGGCTCTCAG CCACCTGCAT AACCGTACCT TTCTGGTTTT TCATCCTGCC TGGGCTTATT TTGCCAGAGA CTATAATCTG AAAGAACTTT CCATTGAAAT AGAAGGCAAA GAACCCACCC CCCAGCAGAT GATAGAAATA ATAGATTTGG CTATACAAAA TAATATCAGC ATTGTCTTTG CTTCCCCCCA ATTTTCCAGC CGGAGTGCAG AGTCAATTGC CTCTGAAATA GGCGGGCAGG TGATAATGAT AGACCCGCTG GCCCAAGATT ACATAAAGAA TATGGAATTT GTTTACAAGC AAATGCAAGA GGTTATGAGC TGA
|
Protein sequence | MKLRTLFLSL ALGVTLLSSL LLAGCQEDSS SAAKLKIAVS IVPLKEFTQQ IAGDKAEVIL MVPPGAEPHT YQPLPSQMVD ISQADMYVKL GSDFGFEQTW ISKILALNHS MLMVDSSVNI TLESSSEGDG ADPHIWLSPR NAIQMVKNIT TGLMSLDPEN KSYYVANRDA YLAKLEQLDN EITLALSHLH NRTFLVFHPA WAYFARDYNL KELSIEIEGK EPTPQQMIEI IDLAIQNNIS IVFASPQFSS RSAESIASEI GGQVIMIDPL AQDYIKNMEF VYKQMQEVMS
|
| |