Gene DET0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0600 
Symbol 
ID3230063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp550943 
End bp552031 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content50% 
IMG OID637120165 
Productsoluble hydrogenase, tritium exchange subunit 
Protein accessionYP_181342 
Protein GI57234595 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00706485 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACC TGAGAATCCC CGGACCTACC CCCTGTCCTG AAGAAGTCTT AACCGCCATG 
GGCCAGCAGA TGATAAACCA CCGCGGACCC GAAATGGCAG CTATCATGAA AGAGGTAGCT 
GAAAAACTGA AGTATTTCTT CCAGACTAAA AATGATGTCT TGGTGCTCAC TGGCTCAGGT 
ACTGGCGGCC TTGAGGCCGC GGCTGTCAAC TTTTTATCTC CCGGTGAAAC CGTACTAAGC 
GTTTCCATAG GTGTATTCGG CGAACGCTTT GCCAAGATTG CCTCCATTTT CGGGGCTAAG 
ATAATTGCCC TTAATTTTGA GCACGGCAAA GCGGCTGACC CCGCTCTGGT CAAAAAGGCT 
CTGGCGGAAC ACCCCGAAAT AAAAGCGGTG CTGATTACCC ACAACGAAAC CTCCACCGGC 
ATCACCAATG ACCTTAAATC TCTGGCATCC GTAGTAAAGG GTGCCGGCAA GCTGCTGATG 
GTAGATGCCA TTTCCAGCCT CAGTTCCATT GACCTGCCGG TTGACGAATG GGGTTGTGAC 
GTAGTTGTAT CCGGCTCACA AAAAGGCTGG ATGGTTCCCC CCGGTCTGGC TTTTATTTCC 
GTCAGCCCTG ATGCCTGGAA AGCCAATGCC GAATCCAAGA TGCCCCGTTT CTACTGGGAC 
TTGGCTAAAC ACAAAGCCAG CATTGAGAAA GGGCAGACCC CCTGGACGCC CTGTGTTTCA 
GTTATTGTAG CTTTACACAA AGCTTTAGCA ATGATGGAAA AAGAAGGTAT GCAGAATATT 
TTCAAGCGCC ACCAGAAAAT TGCTGACTTT ACCCGCAAGG GTGTCAAAGA GCTGGGTTTG 
ACCCTGCTTG CCGAAGAAAA ATATGCATCC AACACCGTTA CTGCTGTTTT GGCTACCGAG 
GGGCTTGACC CCAAGAAGCT CTTAAAGGTA ATGCGCGAAG AATACAACAC CGTGCTGGCC 
GGCGGACAAG GCCCTCTGGA AGGCAAGATT TTCCGTATAG GCCATCTGGG TTGGGTAACC 
GAAAATGACA TTAAAGTCAC CCTGGACAAT CTTAAATTAG CCCTGCCCAA GGCAGGTTTC 
AGGAGTTAA
 
Protein sequence
MQNLRIPGPT PCPEEVLTAM GQQMINHRGP EMAAIMKEVA EKLKYFFQTK NDVLVLTGSG 
TGGLEAAAVN FLSPGETVLS VSIGVFGERF AKIASIFGAK IIALNFEHGK AADPALVKKA 
LAEHPEIKAV LITHNETSTG ITNDLKSLAS VVKGAGKLLM VDAISSLSSI DLPVDEWGCD 
VVVSGSQKGW MVPPGLAFIS VSPDAWKANA ESKMPRFYWD LAKHKASIEK GQTPWTPCVS 
VIVALHKALA MMEKEGMQNI FKRHQKIADF TRKGVKELGL TLLAEEKYAS NTVTAVLATE 
GLDPKKLLKV MREEYNTVLA GGQGPLEGKI FRIGHLGWVT ENDIKVTLDN LKLALPKAGF 
RS