Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0595 |
Symbol | pth |
ID | 3230075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 544553 |
End bp | 545122 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637120160 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_181337 |
Protein GI | 57234607 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA TTATCGGGCT GGGAAACCCC GGCAAAGAAT ATTCGGGCAA CCGCCATAAC GTAGGTTTCC AGTGCCTGAG CCGTTTTGCC AAAGACAACC ATATCAGCTT TGACAAAAAA TGCTGCCTTT CCCGCACCGG TTCCGGCCGC ATAAATGACG AAGAAATAGT GCTGGCCAAA CCCCAGACCT ATATGAACCT CTCCGGCAAA GCCGCCAGCC AGCTGCTTCG CCGCTACAAC CTTAAAGCCG CTGATATTAT TGTAGTGCAG GATGATTTGG ATTTGCCTGC GGGCAAAATC CGACTGCGGC TGGGGGGGAG TGCCGGCGGG CATAACGGCA TTTCATCTAT TATTACAGAC ATCGGCACCA AGGAATTTAT CCGCCTGAAG ATAGGTATCG GCAAGCCGGA TAGCCGGAAT AACGGAACTG AGGTGGTAGA CCATGTACTG GGCAACTTCG GCGGGGAAGA ACGGGAGATT ATGGACAAGG CTATTACCCG TGCTTCCGAA GCACTCACCT GCCTGCTGAC CTTTGGACTG GATACCGCCT CCAACCGTTT CAACTCTTAA
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Protein sequence | MKLIIGLGNP GKEYSGNRHN VGFQCLSRFA KDNHISFDKK CCLSRTGSGR INDEEIVLAK PQTYMNLSGK AASQLLRRYN LKAADIIVVQ DDLDLPAGKI RLRLGGSAGG HNGISSIITD IGTKEFIRLK IGIGKPDSRN NGTEVVDHVL GNFGGEEREI MDKAITRASE ALTCLLTFGL DTASNRFNS
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