Gene DET0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0590 
Symbolgap 
ID3230088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp540536 
End bp541540 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content50% 
IMG OID637120155 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_181332 
Protein GI57234620 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000161937 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACCA GAATCGGCAT TAACGGATTC GGGCGAATCG GGCGTATTAC CCTAAGGACT 
ATTAACCAGT ACCACCGCGG CGAACTTGAA GTAGTAGCGG TAAATGACCT GGCCGACAAT 
AAATCCAACG CCCACCTTTT AAAATGGGAC TCAACCTACG GCAAATATCC CGGTACAGTT 
GAATCTGATG ACTGCTCTAT AATAGTAGAC GGCAAACCCA TCAAGGTTTT CAGCGAACGT 
GACCCCATGC AGATCCCCTG GGAGACCGCC GGAGTAGATT TGGTGATTGA ATCTACCGGT 
TTGTTTACCG ATGCCGCCAA AGCCTCCTCC CACCTTCGCG GCAGTGTTAA GACTGTGGTC 
ATTTCAGCCC CGGCCAAGGG TGAAGATATC ACCGTGGTTA TGGGTGTAAA CGAAGAAAAA 
TATAACTGCA ATACTCACCG TGTTATCTCC AATGCCTCCT GCACCACCAA CTGTGTCGCC 
CCCCTTATAA AGGTACTCCA TGATAAATTC GGGGTTAAAA AAGGTTTCAT GACTACCTGC 
CATGCCTATA CCAATGACCA GAAGATACAG GATATGTTCC ACAAGGATAT CCGCCGGGCC 
AGAGCCGCCG CGGTCAATGT TATCCCCACC ACTACCGGAG CTGCCAAAGC AGTAGCTTTG 
GTGCTGCCCG AACTTAAAGG CAAGCTGGAC GGCATTTCAT TCCGCATACC CTCTGCCAGC 
GTTTCACTGG TGGATTTTGT GGGTGAACTG GCCAGAAATG TAACCGTAGA GGAAGTAAAC 
GCCGCTTTCA AGGAAGCCGC CCAGGGCAAG CTGGCCGGAA TACTGGAATA CTGCGAAGAG 
GAGCTGGTCA GCAGTGATTT CAAGGGCAAC CCTGCCAGTT CCATCATAGA TGCCCCCAGT 
ACTATGGTGC TGGACGGCAA TATGGTAAAA GTACTTTCAT GGTATGACAA TGAGTGGGGT 
TACTCCACCC GCCTGGGAGA TTTGATAGCT TACATCTCCA AATAA
 
Protein sequence
MVTRIGINGF GRIGRITLRT INQYHRGELE VVAVNDLADN KSNAHLLKWD STYGKYPGTV 
ESDDCSIIVD GKPIKVFSER DPMQIPWETA GVDLVIESTG LFTDAAKASS HLRGSVKTVV 
ISAPAKGEDI TVVMGVNEEK YNCNTHRVIS NASCTTNCVA PLIKVLHDKF GVKKGFMTTC 
HAYTNDQKIQ DMFHKDIRRA RAAAVNVIPT TTGAAKAVAL VLPELKGKLD GISFRIPSAS 
VSLVDFVGEL ARNVTVEEVN AAFKEAAQGK LAGILEYCEE ELVSSDFKGN PASSIIDAPS 
TMVLDGNMVK VLSWYDNEWG YSTRLGDLIA YISK