Gene DET0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0572 
Symbol 
ID3230120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand+ 
Start bp524903 
End bp525571 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content53% 
IMG OID637120137 
ProductRadC family DNA repair protein 
Protein accessionYP_181315 
Protein GI57234651 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.611512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGATT TGCCGCTGGC CGAAAGACCC AGAGAAAGGC TTCAGTCTTT GGGGGCAGGG 
GTGCTTTCCT CAGCCGAACT TCTGGCGGTT ATTTTGGGGC GGGGAGTAGC GGGTGAACCG 
GTTTTACAGA GCGCTCAGCG CCTGCTTACC CACTTCGGCG GTCCGTCAGG CATAGCCTCG 
GCCAGCGTGG AGGAACTTTT AAAACTGAAA GGCATAGGTC TGGCCAAAGC CTGCCAGCTG 
AAGGCTGCTT TTGAACTGGC TAAACGGGCA GGCGGGATTA AAGCCGAATA CCAGCCCTGC 
ATCAAAACCC CGGAAGACGT TTTTCAAATA ATATACCCGC TGGTCTGTGA CGAAAAAAAG 
GAACATTTTT TCTGCCTGAT GCTGGATGTC AAAAGTAAGC TTATCCGGGT AGGGCATATA 
TCTGCCGGCA GCCTGGATGA GAGTGTGGTG CATCCGCGCG AAGTCTTTAA AGAAGCACTT 
TCCGCCAGTG CCGCAACCGT AATACTGGCA CACAACCATC CCTCCGGGGA AAGTGAACCC 
TCGCCGGATG ATATCGGCCT GTCCGCCCGC CTAAGAGAGG CCGGGGGTAT AATGGGGATA 
GAAGTGCTTG ACCATGTAAT AATAGGCGGA CAAACTTTTA CCAGTTTAAA AAGACAGGGG 
CTTTTATAA
 
Protein sequence
MRDLPLAERP RERLQSLGAG VLSSAELLAV ILGRGVAGEP VLQSAQRLLT HFGGPSGIAS 
ASVEELLKLK GIGLAKACQL KAAFELAKRA GGIKAEYQPC IKTPEDVFQI IYPLVCDEKK 
EHFFCLMLDV KSKLIRVGHI SAGSLDESVV HPREVFKEAL SASAATVILA HNHPSGESEP 
SPDDIGLSAR LREAGGIMGI EVLDHVIIGG QTFTSLKRQG LL