Gene DET0565 details

Gene Information

• Locus tag: DET0565
• Symbol: atpC
• ID: 3230135
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 520082
• End bp: 520504
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637120130
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_181308
• Protein GI: 57234666
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0014162
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCTAAAT TAAAGCTGGA CATAGTAACT GCGGAACGTT CGGTCTTTTC CGAAGAGGTG 
GATTTGGTGG TTGCCCCTGG TATTGAGGGT GAAATGGCCA TACTGCCTCA TCATGCCCCG 
CTGATGACAG CTTTGCAGGC GGGGGAACTT AAGGCCAAGA TAGGCTCTGA GGAGTATTCT 
ATGGTGGTTT CCGGCGGTTT CCTTGAGGTG CGGCCTGACA GGGTAATTGT ACTGGCGGAC 
AGTGCTGAAA GGGCTGAGGA AATTGACATT GCCCGGGCTA CCGAGGCTAA GAAGAGGGCT 
GAAGCCCGCA TGGCTGACAA ATACGAGCCC GGTATGCTGG CTGCCGAAAC AGAGGCTTCG 
CTGAGACGGG CTATGATACG CCTTAAGGTG GCTGAGAAGC GGCGGAAACG CCCCTCTGTT 
TAG 

 

Protein sequence

MAKLKLDIVT AERSVFSEEV DLVVAPGIEG EMAILPHHAP LMTALQAGEL KAKIGSEEYS 
MVVSGGFLEV RPDRVIVLAD SAERAEEIDI ARATEAKKRA EARMADKYEP GMLAAETEAS 
LRRAMIRLKV AEKRRKRPSV