Gene DET0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0552 
SymboldnaG 
ID3230114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp507673 
End bp509445 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content49% 
IMG OID637120118 
ProductDNA primase 
Protein accessionYP_181296 
Protein GI57234645 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACG CTGTAGAAGA AATAAAGCAA AAACTGGATA TCGTGAGCTT TATCGGCCAG 
TATACCAAAC TGACCAAAGC AGGCCGCACT ATGCGCGGAA TCTGCCCTTT TCACAGCGAA
AAACACGGCT CTTTCTTCGT TTACCCCGAA GCCCAAAACT GGCACTGTTT CGGAGCCTGC
AATACCGGCG GGGATATTTT CGCTTTCGTA ATGAAAAAAG AAGGGCTGGA TTTTAAAGGG
GCACTGGAAC TGCTGGCTGA AAAAGCGGGC GTAAGCTTGC CCAGCCAGAT AAACCCGCAA
ATCAGAGACC AGCGTGAGCG TCTGTATGAA ATAAATTTGG CAGCCGCCCA GTATTACCAT
AACCTGCTTT TAAACAGCCC CCAGGCGGAA AGTGCCCGCA GTTACCTTAA ATCACGCGGC
TTAAATGAGC AGTCTCTGGC AGATTTCCAG TTGGGATACG CCCTGCCTGA ATGGCAGGGG
CTTTATGACT ATCTGAAAGA ACGCAGTTAT ACAGATGAAG ACCTGCTGAA AGCCGGTGTA
ATAGTCCGCT CTGACGAGGG GCGGATTCAT GACCGCTTCC GCAATAATAT TATTTACCCC
ATTGCCAACT ACAAAGGGCA GATAGCCGGT TTCGGGGCAC GGGTGATGGA TAACTCACAG
CCCAAATACC GCAATTCCCC CCAGACAGAC CTTTTTAATA AAAGCAGCCT GCTGTACGGT
TTGCATCTGG CTTCCGCCAG CATACGGGAA AAGAACCAGG CCATTATAGT GGAAGGCTAC
ATGGATGCCA TTATGTCCCA CCAGGGCGGT TTTACCAACA CAGTGGCCTG CATGGGTACT
GCCCTGACTG ACCGCCAGAT AGCTTTGGTA AAACGCCAGA CTAAGCACCT TATACTGGGG
CTGGATGCGG ATTCAGCCGG TGAGGAAGCC ACCCTGAGGG CTATAGATTA TGAAAACCAG
ATAGAGTCCG AAATACGGGT AGCCGTACCC GAAGGCGGCA AAGACCCGGA TGAAATTATC
CGCCATGCAC CCCAGACCTG GCAGGAAATA CTGGATAATG CCCGCCCCCT GCTGGACTAT
ATATTTGAAC ACAGCCAGAA AGGTCTGGAC CTGAGTTCCG CAGCAGGCAA AGCCGGACTG
ACCGACCGCC TGCTGCCCAT AATATCCAAA ATGGAAGACG GGGTACGCCA GTCCCATTAC
CTGGGCAAGC TGGCTGAAAT GGTAAGCACC AGCCAGAACC GTATACTGGA GCGGATGAAA
AAACTGAAAA ATGAAACCCG GATTACCAAA GTTTTGGAAA AGGAAGCCCC TTCTAAAACA
GTTTCAGCCG CCAAAAACCC GGCTCTGGAA GAGTATGCTC TTAGCCTGCT TTTCAAATCA
CCGGAACTCA GCCGCTTTGC CGGAAAACTT CACCCGGAGT ATCTTGAAAT ACCCCAGTAC
CGGGAATTGC TGGCCGTTTA TAGCCAGTCT GCCGAAAAAG ACAACCTGCG GGCAGCACTT
GATGAAAACC TGCGGGAATA TTATGACAAC TTGATGAATA AAAATCCGGC AAATGATAAT
ATAGAGGATA AGTTTTATGA CCTATGCCTG AGGCTGAGAG AAAGATACCT CAGGAACTTG
GCGGTAAAAC TTAATCAGGC CCTAAATGAA ATCAGCCAGC CGGAAACTGC TGAATACCAG
ACGCTTAATG ACCAGTGTGT AAAGGTCAAC GAAGAATTGC GGAGTGTATT CAGCCTTAAA
GACAGGCGAA ACCAGAAACA GAGGAGACAA TAA
 
Protein sequence
MNDAVEEIKQ KLDIVSFIGQ YTKLTKAGRT MRGICPFHSE KHGSFFVYPE AQNWHCFGAC 
NTGGDIFAFV MKKEGLDFKG ALELLAEKAG VSLPSQINPQ IRDQRERLYE INLAAAQYYH
NLLLNSPQAE SARSYLKSRG LNEQSLADFQ LGYALPEWQG LYDYLKERSY TDEDLLKAGV
IVRSDEGRIH DRFRNNIIYP IANYKGQIAG FGARVMDNSQ PKYRNSPQTD LFNKSSLLYG
LHLASASIRE KNQAIIVEGY MDAIMSHQGG FTNTVACMGT ALTDRQIALV KRQTKHLILG
LDADSAGEEA TLRAIDYENQ IESEIRVAVP EGGKDPDEII RHAPQTWQEI LDNARPLLDY
IFEHSQKGLD LSSAAGKAGL TDRLLPIISK MEDGVRQSHY LGKLAEMVST SQNRILERMK
KLKNETRITK VLEKEAPSKT VSAAKNPALE EYALSLLFKS PELSRFAGKL HPEYLEIPQY
RELLAVYSQS AEKDNLRAAL DENLREYYDN LMNKNPANDN IEDKFYDLCL RLRERYLRNL
AVKLNQALNE ISQPETAEYQ TLNDQCVKVN EELRSVFSLK DRRNQKQRRQ