| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0549 |
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| Symbol | |
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| ID | 3230117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 503356 |
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| End bp | 505935 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637120115 |
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| Product | exonuclease SbcC, putative |
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| Protein accession | YP_181293 |
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| Protein GI | 57234648 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCTG TCAAACTCAA AATAAAAAAC TTTATGTGCT ACCGCGGCGA AATTCCGCCT
TTTTCTTTTA ACGGGGTGCA TACCGCCTGC ATCTGCGGCC AGAACGGGGC CGGCAAATCT
GCCCTGATAG ATGCCATTAC CTGGGCACTC TGGGGAAAAA GCCGGGCTAA AAGTGATGAT
GACGTGGTCT CTTTGAACGA ACAGGAAGCC GAAGTAAGCC TTGATTTTGA AATTTCAGGG
GAACTGTATC AGGTTATCCG CCAGCGGCAG CGGCCTAAAA AAGCAGGGGC AAACGGACAA
AGCCTGCTGA GCCTGTTTGC CATTAAGGAC GGGAAACCCC TGAATATCAC CGGGGATACT
CTGACCCAAA CAGAGAAGAA GATAATTTCC ATATTGCATA TGGACTATGA CACCTTTATA
AACAGTGCTT TTCTGCGGCA GGGGCATGCC AACCAGTTTA CCCAGCAGCC CCCCGGCAAA
CGCAAGGAAG TACTCTCCAA TATACTTGGG TTAGAAATAT ATGACCAGCT GGAAGACCTG
GCCAGACAGG CCGTACGCGA GGCAGAGGCT AAAAAACTGC TTATAGAGCA GAGTATTGCA
GACGGCCAAG AAGGGCTAAA ATCCAGACCG GAACTGGAAG AAACTTTAAA AAATACCCGC
CTGGATCTGA CAGATGGTGA GGAGAAACTG AAAACCCATC TTGCCAAACT GGAAATCCTA
AGGCACAAAA AACATGCCTT TGATGCCAAA CAAAGTGCCT GCCTCCAGAT AGAAAAAGAC
CTGCGGGATA TATCAAAAGA CCAATCCCTT TGGCTTCAAA ACCAGCAGGA AATAAAAGAG
CGTATCAGCA CCTTTGAAAC ACTCATCGCT CAGGAAGAAG CGATTCTCAA AGGCTATAAG
GAATACTCAG ACTGCCAAAG CCTGTATGAA AAACACAACC GAATACTGGC AAAACTAAGG
CAGCTGGAAA AAGAAAAAAA ACCGCTGGAA GATGCCGTTT ATAAAGAAGA AAACAGCCTG
AAAAACACCC TGACTAAATA TCAGGAACAC CTCAAAATGC GGCAGGAAAC CGCCCAGACT
TTGGGCACAC TGGAACAAGA AAAAACCCTG TCAGACCAAC TGCACCTGGA GCTGGAAAAT
GAAGAGACTG CCTTAAAAGC CCGGCAAACC AGGCTGGCGG ATATGCAGGG GAGTTTAGCC
GGACTAGAGA CCGAGTATGC CGGTACAGCC AGGGAAATAA ACTCTCTGGA AGAAAAACTA
AAACTGCTTA CCGAAGCAGG TGAAAGCCGC TGCAACTGCC CCCTGTGCGA AACCGAGCTG
GGGCATGACA AACTCAAACT GGTATTCGGC AAATACCGGA CAGAACAAGA TGCTAAGGAA
AAACAGCAAA GCAGCCTGAA ACTAAAGCTT GAGCAGCTGA GGCTGGATAT ACAGACCCTA
ACTGCCCAAA TTGAAACTGA AACCAAACGC TTAAACCAAA AGCGCAGGCA GTATGAGGGA
CAGCTGAGCG TACTGGAAAA AGGGATTGCA GACGCCAAAG ATGCCGGAAC CAAAGCGGCA
AAAGGCAGAG AGCTGATTTC GGATATTGAG AAGCAGCTGA ACCAACGCAG TTATGCCGTT
TCCGAGCAAG CCAGTCTGGC AGTAATTGAA AAAGAAATAC AGGAACTTAA TTTTGATAAC
GCCGAATACA CCCAAAACCA GCAAACTTTG GCCGGCCTGA CCCATTTTGA GGAGCAAAAA
CGCAAACTGG ACGATGCACA AAGCCGCCTG CCACGGGAAA AAGATAGCTT GGAAAAAACG
GCTTCAGCAC TGGCAGAACT CACCGCCCGC CATAATACTA AACTGAGTGA GCAGCAAACC
CTGCAAAGAG AACTGGCTGA ACTGCCCGCA CTGGAGCAGG AGCTGGAAAC CGCCGAAGCC
GGATACAAGT CACTCAGCCA AACGCAAGAT ACCTTGAGGC AACAACTGGG TTCGCTCAGC
CAGAAAGAAG AACAGCTGAA CGAACTTGAA AAGAAGCTGA AAAAACAGGA GCAGGATAAA
GAGCAAACCG CCAAAGAAAT ATACTACTTT GGTAAACTGG CCAGAGCTTT CGGCAAGAAA
GACGGCATCC AGACCATGCT TATTGAAGAC ACCCTGCCGG AACTGGAAAG CGGGGCAGAC
CTGCTGCTGT CACGGATGAC TGACGGGCGT ATGCATCTGA GTATAGAAAC CCAGCGTTCC
ACCAAAAAGG GAGACCAGAC CGAGACGCTG GATATAAATA TCTCGGATGA GCTGGGCACC
CGCAACTACG AAACATTCAG CGGGGGTGAG GCTTTCAGGA TAGATTTTGC GGTCAGGATT
GCCCTGTCAC GCCTGCTGGC AAACCGTCTG GGCGCACCCT TGCGGACGCT GATTATTGAT
GAAGGCTTCG GCACACAGGA CTCAACCGGT ATTGAACGTC TGAAAGAGGC TATAAACTCT
ATTCAGGATG AATTTGATAA AATACTGGTC ATAACCCATA TAGATGACCT GAAAGATTCT
TTCCCCACCC GCATTGAGAT AGATAAAACC CCGTCAGGCT CAGCTATACG CTTAAACTAA
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| Protein sequence | MIPVKLKIKN FMCYRGEIPP FSFNGVHTAC ICGQNGAGKS ALIDAITWAL WGKSRAKSDD
DVVSLNEQEA EVSLDFEISG ELYQVIRQRQ RPKKAGANGQ SLLSLFAIKD GKPLNITGDT
LTQTEKKIIS ILHMDYDTFI NSAFLRQGHA NQFTQQPPGK RKEVLSNILG LEIYDQLEDL
ARQAVREAEA KKLLIEQSIA DGQEGLKSRP ELEETLKNTR LDLTDGEEKL KTHLAKLEIL
RHKKHAFDAK QSACLQIEKD LRDISKDQSL WLQNQQEIKE RISTFETLIA QEEAILKGYK
EYSDCQSLYE KHNRILAKLR QLEKEKKPLE DAVYKEENSL KNTLTKYQEH LKMRQETAQT
LGTLEQEKTL SDQLHLELEN EETALKARQT RLADMQGSLA GLETEYAGTA REINSLEEKL
KLLTEAGESR CNCPLCETEL GHDKLKLVFG KYRTEQDAKE KQQSSLKLKL EQLRLDIQTL
TAQIETETKR LNQKRRQYEG QLSVLEKGIA DAKDAGTKAA KGRELISDIE KQLNQRSYAV
SEQASLAVIE KEIQELNFDN AEYTQNQQTL AGLTHFEEQK RKLDDAQSRL PREKDSLEKT
ASALAELTAR HNTKLSEQQT LQRELAELPA LEQELETAEA GYKSLSQTQD TLRQQLGSLS
QKEEQLNELE KKLKKQEQDK EQTAKEIYYF GKLARAFGKK DGIQTMLIED TLPELESGAD
LLLSRMTDGR MHLSIETQRS TKKGDQTETL DINISDELGT RNYETFSGGE AFRIDFAVRI
ALSRLLANRL GAPLRTLIID EGFGTQDSTG IERLKEAINS IQDEFDKILV ITHIDDLKDS
FPTRIEIDKT PSGSAIRLN
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