Gene DET0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0536 
Symbol 
ID3230146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp489945 
End bp490778 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content51% 
IMG OID637120102 
Producthypothetical protein 
Protein accessionYP_181280 
Protein GI57234677 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATA TTGTAAAGAT ACGCTATAAA CAAGCCGGCA AGATATATTA TTTTGACCCT 
GCCGGTTTTG AACTTTACCC GTATGACTGT GTAGTGGTGG AAACCAGCCG TGGCGAAGAA
CTGGGCTGGG TGGTTGCCTC TCCTTCACAG GTAGAGGAGA GCAGTCTGGA ACAGCCGCTG
AAGCCTGTTA TCCGTCTGGC TACCGCTGAA GATATGGCCC GAGAACGCCA GCTGGAAGAG
AAAAACCAGA GTGCAGTTTC GGAATGTATA GAGCTGGTAG ACAAGCTGAA TCTGCCCATG
AAACTTATCA GGGCGGAATA CAGTCTGGAT GAAAACCACG TAACCATATA TTTTTCAGCC
GAAGACAGGG TGGATTTCCG CGAACTGGTC AGGGAGATTT CACGCAAGCT GAGAGTCAGG
GTAGAGCTTC GGCAGATTGG CCCGCGGGAT GAGGCCAAGA TGGTGGGCGG TTACGGCCGG
TGCGGACGGG AACTTTGCTG CTGCAGTTTC CTGAGTGAGT TTGACCCGGT GTCTATAAAA
ATGGCTAAAG AGCAAAATTT GCCGCTAAAT CCCCAGAAGA TTTCAGGTGT TTGCGGCAGG
CTTCTTTGCT GCCTTGATTA TGAATATGAA ACCTACAAAG CCGCCAAGGC TAAGATGCCT
AAGGACGGGC TGAAGGTAAT CACCCCGGTA GGCAAAGGTG AAGTGGTCGG CGGTAACCCC
TTGGAAGAAA TGGTATTTGT TCTGCTGGAA AGCGGGGCTA ACGCCGAAGT GCCTTTGAAG
GATATCCGCC CGGATAAAGA AGGCCGCCGT CCTGATGCCT CACTCCACCG CTAA
 
Protein sequence
MVDIVKIRYK QAGKIYYFDP AGFELYPYDC VVVETSRGEE LGWVVASPSQ VEESSLEQPL 
KPVIRLATAE DMARERQLEE KNQSAVSECI ELVDKLNLPM KLIRAEYSLD ENHVTIYFSA
EDRVDFRELV REISRKLRVR VELRQIGPRD EAKMVGGYGR CGRELCCCSF LSEFDPVSIK
MAKEQNLPLN PQKISGVCGR LLCCLDYEYE TYKAAKAKMP KDGLKVITPV GKGEVVGGNP
LEEMVFVLLE SGANAEVPLK DIRPDKEGRR PDASLHR