Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0522 |
Symbol | |
ID | 3230177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 475236 |
End bp | 475649 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637120088 |
Product | hypothetical protein |
Protein accession | YP_181266 |
Protein GI | 57234708 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000722837 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTG TTTTTGAAAA CATAACCGAA GGGCAGGAAA TAGCCTGCCA GATGCTTGCC TTTAGCAGCC GTGACCTGGT TATTTGGGCG GGGGCTTCGG GGGACTATAA CCCCATTCAT TATGATAAAG ACATAGCTTT GAAAAAGGGC TTAGGCGGGG TGGTAGTGCC GGGGCAACTG GTGGGGGCTA TGCTTGGCAG TCTGGCCTCC CGTTTTGCCT GCCCCTCCGG CAGGCTTGCC AAACTGTCTG TCAGTTATAA AAAGATGATG CCTTTGGGTG AAAACCTGGT TCTGAAAGGT ATAGTATCCT CAAAGGCAGA TACACCTGAA AGCAAAAGTC TGAGCCTGAA ACTCTGGGCG GAAGATACCG CCGGTGATAA AACGGTAACG GCGGCGGCTG TTATACTTTA TTAG
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Protein sequence | MTSVFENITE GQEIACQMLA FSSRDLVIWA GASGDYNPIH YDKDIALKKG LGGVVVPGQL VGAMLGSLAS RFACPSGRLA KLSVSYKKMM PLGENLVLKG IVSSKADTPE SKSLSLKLWA EDTAGDKTVT AAAVILY
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