Gene DET0493 details

Gene Information

• Locus tag: DET0493
• Symbol: rplO
• ID: 3230237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 454107
• End bp: 454568
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120059
• Product: 50S ribosomal protein L15
• Protein accession: YP_181237
• Protein GI: 57234768
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.600314
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGATTGA ATGAACTTTC TCCAGCCCCC GGTTCTAAAA AAGACCGCAA GCGGGTAGGC 
CGCGGTGACG CCGGAAGGGG TAACTATTCG GGACGCGGAA TGAAAGGGCA AAAAGCCCGT 
TCAGGCGGAG CGACCCGCCC CGGTTTTGAA GGCGGCCAGT TGCCCATATA TCTGCGTCTT 
CCCCGGAAAC GCGGTTTCTT TAATCCTTTC CGGATTGAAT ACACTGTAGT AAATATTGAA 
CAACTGAACA TATTTGAAGC TGGCACCGAG GTCACTCCTG AGACCATGCT GGCGGCAGGC 
TTAATAAGGA ATTTTGTAAA GCCGGTAAAA ATACTTGCAG CCGGGCATAT TGACCGGGCT 
CTGGAAGTAA GCGCCCATAA ATTTTCGCAG GCAGCCAAAG CTCAGATTGA AGCTGCTGGC 
GGTAAGGTAC AGGAAATAGA TTATGCGGCA GAAATCGAGT AG 

 

Protein sequence

MRLNELSPAP GSKKDRKRVG RGDAGRGNYS GRGMKGQKAR SGGATRPGFE GGQLPIYLRL 
PRKRGFFNPF RIEYTVVNIE QLNIFEAGTE VTPETMLAAG LIRNFVKPVK ILAAGHIDRA 
LEVSAHKFSQ AAKAQIEAAG GKVQEIDYAA EIE