Gene DET0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0488 
SymbolrpsH 
ID3230242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp452072 
End bp452467 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content52% 
IMG OID637120054 
Product30S ribosomal protein S8 
Protein accessionYP_181232 
Protein GI57234773 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000071854 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCTG ATCCGATTGC AGATATGTTA ACAAGAATAC GGAATGGCGT AATGGCCAAA 
CACGAGGTAG TAATCATGCC GGCTTCCCGG ATGAAACAAT ACCTTGCCAA GGTCATGAAA
CAGGAAGGCT TTATTGCCGG TTATGAAGTA ATTGGCGCTA AGCCCAAACG TCAGCTGAAA
ATAGTCCTCC GTTATGACGA AGGTGGTGCT TCCTTTGTCA GCGGGCTGGA AAGAATCAGC
AAACCCGGTC TTCGGGTTTA CGTACAGCGG GGCGAAATAC CCCGTGTTTA CGGCGGTTTG
GGTATTGCCA TTGTCTCCAC CTCAAAGGGT GTGATGACCG GTTCGCAGGC CTGGCGCCAG
GGGCTCGGCG GCGAGCTGCT TTGCAAAGTC TGGTAA
 
Protein sequence
MISDPIADML TRIRNGVMAK HEVVIMPASR MKQYLAKVMK QEGFIAGYEV IGAKPKRQLK 
IVLRYDEGGA SFVSGLERIS KPGLRVYVQR GEIPRVYGGL GIAIVSTSKG VMTGSQAWRQ
GLGGELLCKV W