Gene DET0466 details

Gene Information

• Locus tag: DET0466
• Symbol: aroD
• ID: 3230169
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 439042
• End bp: 439710
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120032
• Product: 3-dehydroquinate dehydratase, type I
• Protein accession: YP_181210
• Protein GI: 57234700
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0710] 3-dehydroquinate dehydratase
• TIGRFAM ID: [TIGR01093] 3-dehydroquinate dehydratase, type I

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.248479
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACC CGCCCGTCTG CTGCGTAATC ACCCGGCTGC CGGAGGCCGA AAGCCTGAAA 
AAAAGCGAAG GTGCGGCCTT TTATGAACTA AGGCTGGACC TGCTGGGTGA AAGCTGGCGG 
GAAGCTGCGG CTATGCTTGA TAAACCATTT ATGGCCACCT GCCGCAGGTC TGCCGAAGGG 
GGCAGTTTTA GCGGCAGCGA AGAAGAACGG ATAGGGCTGC TTGAAAAAGC CGCCGCAGCC 
GGTGCATTTA TGCTGGATAT TGAGTACTCC ACCCCCCATC TGGGTGAAGT ACTTAAGCGG 
CTCAGAACGC AATCAAAGTG TCTGGTGTCC CACCATAATT TTGCTGACAC TCCCTCCGCC 
GGTGATTTGA AGACACTGGT AAAGGATATG CTCAACTACC CGGCGGATAT ATATAAGGTA 
ATTACCACTG CTACCTCAAT AAATGATAAT ATAAAGCTGC TTAATCTGAT AAAGGAGATA 
CCGGATAAAA AGATTGTCGC TTTTGCTATG GGGAATCTGG GCATTCTGAG CCGCATACTC 
TGCCCGCTGG CCGGAAGCCC TTTTACCTAC GCCAGCCTGA ATGACAGCAA TCAGTCAGCA 
TCAGGTCAGA TGACCCTGGC GCAGATGATT GAAATCTACC GGTCAGTGAA CTATGAAAAC 
CATACCTGA 

 

Protein sequence

MKNPPVCCVI TRLPEAESLK KSEGAAFYEL RLDLLGESWR EAAAMLDKPF MATCRRSAEG 
GSFSGSEEER IGLLEKAAAA GAFMLDIEYS TPHLGEVLKR LRTQSKCLVS HHNFADTPSA 
GDLKTLVKDM LNYPADIYKV ITTATSINDN IKLLNLIKEI PDKKIVAFAM GNLGILSRIL 
CPLAGSPFTY ASLNDSNQSA SGQMTLAQMI EIYRSVNYEN HT