Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0417 |
Symbol | |
ID | 3230265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 392594 |
End bp | 393355 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637119983 |
Product | amino acid ABC transporter, ATP-binding protein |
Protein accession | YP_181162 |
Protein GI | 57234796 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00684125 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA AACAGACCGC AGCCGAACAA CCTATTATCA AGATTGAAAA CGTCCAGAAG CATTTTGGAC GGGTAAAGGC CCTGCGCGGG GTCAGCCTTG ATATCAAACG GGGCGAAGTA GTGGTGATTA TCGGCCCTTC GGGTTCGGGT AAATCTACCC TGCTCAGATG CATAAACCGG CTGGAAGAAT ATGACTCCGG CAAAATAACC GTAGACGGCA TCCCCCTGGA CAGCACCGAA AATATCAATC ATGTCCGCCG TGAGGTAGGC ATGGTTTTCC AGTCATTCAA CCTCTTTTCC CACCTGAAGG TCATTGATAA TATCACCCTT GCCCAGTGCC AGGTGCGCAA ACGCACTAAA GAGGAAGCGG CCGAGATTGC GGCAGATTTG CTTAAAAAAG TGGGCATACC GGACAAGGCC CATGCCTTCC CCGTTCAGCT TTCAGGCGGC CAGCAGCAGC GGGTCGCCAT AGCCAGAGCC TTAGCCATGA ACCCCCAGAT AATGCTCTTT GACGAGCCTA CTTCCGCCCT TGACCCGGAG ATGATAAAAG AAGTCCTGGA CGTGATGACC ACTCTGGCCA AAGAGGGTAT GACTATGGTG GTGGTATCTC ACGAAATGGG CTTTGCCAGA GCGGCGGCTG ACAGGGTGAT TTTTATGGAC GAAGGCCTGA TAGTGGAGAG TGCCGCACCG GACGAATTTT TCACCAACCC CAAGCACGAA AGAACCAAGC TCTTCCTGTC TAAAATCCTG CACAACTCCT AG
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Protein sequence | MNKKQTAAEQ PIIKIENVQK HFGRVKALRG VSLDIKRGEV VVIIGPSGSG KSTLLRCINR LEEYDSGKIT VDGIPLDSTE NINHVRREVG MVFQSFNLFS HLKVIDNITL AQCQVRKRTK EEAAEIAADL LKKVGIPDKA HAFPVQLSGG QQQRVAIARA LAMNPQIMLF DEPTSALDPE MIKEVLDVMT TLAKEGMTMV VVSHEMGFAR AAADRVIFMD EGLIVESAAP DEFFTNPKHE RTKLFLSKIL HNS
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