Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0413 |
Symbol | |
ID | 3230276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 389965 |
End bp | 390438 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637119979 |
Product | cytidine/deoxycytidylate deaminase family protein |
Protein accession | YP_181158 |
Protein GI | 57234807 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2131] Deoxycytidylate deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.142884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCC CGAATGCAGA CGAATATTTC CTTAAGATAG CGGCGGTGGT TGCCGAACGT TCTACCTGTG TCCGCCATCA TGTCGGGGCG GTAGCCGTAA AGGATAAACA TATTCTCTCC ACCGGTTACA ACGGGGCACC GGCCGGTCTG ACAGACTGTC TGGAACTGGG CTGCCTGCGT AATCAGAACG GCATACCATC GGGTACCCGC CATGAGATTT GCCGGGCAGT CCATGCCGAA CAAAATGTTA TTATCCAGGC GGCTTTGCAT GGCACCAGTC TGGAAGGGGC AACAGTATAT GCCACCCATA CCCCCTGTGT GCTGTGTGCC AAAATGCTGA CCAATGCCCG TATCAAACGC TACGTCAGCT ACGGCAAATA CGCAGATGAT TCATTTATAG ATATGTTCAA ACAGGCGGGG ATAGAGGTAG TTATAAAAGA CCGCCCCCCC GGCATAGTAG AATATCTGGA CTAA
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Protein sequence | MSRPNADEYF LKIAAVVAER STCVRHHVGA VAVKDKHILS TGYNGAPAGL TDCLELGCLR NQNGIPSGTR HEICRAVHAE QNVIIQAALH GTSLEGATVY ATHTPCVLCA KMLTNARIKR YVSYGKYADD SFIDMFKQAG IEVVIKDRPP GIVEYLD
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