Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0393 |
Symbol | |
ID | 3230271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 373929 |
End bp | 374273 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637119959 |
Product | iojap-like protein |
Protein accession | YP_181138 |
Protein GI | 57234802 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00274134 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAATCAA TAGATATTGC CCGGCAGATG GTAAGTATAG CCAGTGAGAA ACAGGCTGAA GATATAGTCC TTTTGGATGT CAGGGAGTTG GTTAGTTACT GTGATTATTT CGTGCTGATG AGCGGCGCTT CCGGCCGTCA GCTTTCGGCT ATTGCGGATA CGGTTGAAAA GACCTTTAAA CCTCTTAAAA TAGGGCCGCG CCACCGTGAA GGTGACGCGG ATTCAGGCTG GATACTGCTT GATTTCGGCG GGGTGATTGC CCATATATTC ACCCCCGAAA TACGCTCTTA TTATAAGCTT GACCGTCTCT GGGAGAATGC CCCCAAACTG GTTTCTGTCC AGTAA
|
Protein sequence | MESIDIARQM VSIASEKQAE DIVLLDVREL VSYCDYFVLM SGASGRQLSA IADTVEKTFK PLKIGPRHRE GDADSGWILL DFGGVIAHIF TPEIRSYYKL DRLWENAPKL VSVQ
|
| |