| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0334 |
|---|
| Symbol | |
|---|
| ID | 3230394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 318432 |
|---|
| End bp | 319913 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637119901 |
|---|
| Product | polyA polymerase family protein |
|---|
| Protein accession | YP_181081 |
|---|
| Protein GI | 57234925 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000707313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGAATA AAAACCTGCT GCTCCGTATT GATAAAAAAA CCGCCGCCCT GCTTGAAGAC
CTCCGCCGTT TATTTTCAGA AGAAGCTAGC GAAGTCTATC TGGTAGGCGG TTTTTTGCGT
AATCTGATAC TTAAAAAACC CACTGCCGAT ATTGACCTGT GCATCACCGG CAGCGGACAA
GCCGCTTCTG CCAAAATCTC CGGTTATTTC AAAGCCCCTC AGGTGGTGCT GGATGCCGGA
AATGACGTCT TTAGAGTAAT CCTGCCCGCT TTTCAGCTGG ATATCTCCGG CACGGCAGAT
ATTACTGCCA ACCTCACCCG GCGTGATTTC AAACTTAACG CCATGGCCGC ACCCTTGTCG
GCGGTACATC AGGGCAGCCT GCCGGTACAG GCCATAATTG ACCCCATGCA GGGGCTGCCG
GATATTGAAA ACCGGGTTAT ACGGGTAACC TCAGCAGATG TATTCAGTGC TGACCCCATC
AGGCTGTTAA GGGCTATCCG CTTATCAGCC GAACTTGGCT TTGCACTTGA CGGGCAAACC
CAAAGCCTTA TCACCACCCA TGCCGCCCTG ATATCAACCG TTGCCGGTGA GAGAATTCGG
GAAGAACTGC TGAAACTGCT TGAAACCAGC CAGCCCGGCA TCTGGGAAAA GTGCCTTGAG
CTGGGGCTGC TGCTAAACAT ATTCCCTGAG CTTACTCCCT GCTGCCGCCA CCCCCAGCCC
TATGAACACA CCTGGGATGT GCTGGAACAC TCCATAAAAA CCATTTATGC ACTTGATGCC
ATACTGGGCA GGTCTGTCTG GCCTTACCAG AACCCTGAAA TCATCACCGC AATCTACCGC
GAAAGCGGCT TTAAAAAATA TTTTGCAGGG AAAATAAGCG GCACTTCCAG TATCCGCACC
TTAACCAAAC TGGCCGCTCT GCTGCACGAT ATCGCCAAAC CCCAGACCCG CAGCACCGAC
CCGGACGGGC GGATACGTTT TACCGGACAC CCGCTGGAAG GCAGCCGCTT AAGCAGCCAG
ATACTCACCC GCCTGCGTTT TTCAAAAAAA GAAATTTTAA TGGTAGAAAA AATGGTTTGC
TACCATCTGC GCCCGGTTCA AATGAACCCT GACGGCCAGT TACCCTCCGC AAAAGCTATT
TACCGCTATT TCCGTGACCT AGGGGAAGCC GCCGAATCTA CCCTTTATCT GAGTCTGGCA
GACCATTTGG CAACAGACGG GCCGAATTTG ATGGTGGCAA ATTGGCAAGA ACATGTTAAT
ATAGTAGCGC ATATTTTATC GGAGCAGAAA AAACAGCTTA CCAGGCTTGT TCCGAAACGT
CTGGTGACCG GCACCGACCT GATAGAGCGT TTTAACCTCA GGCCGGGACC CCGGATAAAA
ACCCTGCTGG GTGAAATTAC CGAGGCCCAG GCGGCCGGTG AAATAAAAAA CCGCCAGGAG
GCCTTTAAAT TTATCAGCCA AAGGCTTGAA GGACAAGCCT GA
|
|---|
| Protein sequence | MTNKNLLLRI DKKTAALLED LRRLFSEEAS EVYLVGGFLR NLILKKPTAD IDLCITGSGQ
AASAKISGYF KAPQVVLDAG NDVFRVILPA FQLDISGTAD ITANLTRRDF KLNAMAAPLS
AVHQGSLPVQ AIIDPMQGLP DIENRVIRVT SADVFSADPI RLLRAIRLSA ELGFALDGQT
QSLITTHAAL ISTVAGERIR EELLKLLETS QPGIWEKCLE LGLLLNIFPE LTPCCRHPQP
YEHTWDVLEH SIKTIYALDA ILGRSVWPYQ NPEIITAIYR ESGFKKYFAG KISGTSSIRT
LTKLAALLHD IAKPQTRSTD PDGRIRFTGH PLEGSRLSSQ ILTRLRFSKK EILMVEKMVC
YHLRPVQMNP DGQLPSAKAI YRYFRDLGEA AESTLYLSLA DHLATDGPNL MVANWQEHVN
IVAHILSEQK KQLTRLVPKR LVTGTDLIER FNLRPGPRIK TLLGEITEAQ AAGEIKNRQE
AFKFISQRLE GQA
|
|---|
| |