Gene DET0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0134 
Symbol 
ID3230500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp132330 
End bp132749 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID637119702 
Producthypothetical protein 
Protein accessionYP_180884 
Protein GI57235030 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC CCGGGAATAT TTTTAAACGT GAACACGGAT TTACCCTGAT TGAAATACTG 
GTAGTTGTGG CTATACTGGG GGTGCTGGCC GGAGTGGTAA TACCCAATGT AGTAAAATTT
ATGCACGAGG GTAAGGTAGA ATCTGCCAAT ACCGAACTGG CAAATGTCCG TCTGGCCGTC
CTGTCAGCTA TGGTGGATGC GGAAATAAAC ACCCTGAATG ACGGCGGGAC AGTCGGCTCC
GGCCATACCT CAAATGTCAG CTACGGCTCA CCTTCGGTAA GCTTGGCAGT TCATAATTTT
GTTATGGGTG AAGTAATAGG TATTTATACC CTGAATGAAA AAGGCCTGAT AGTAAGCGCC
CTGATGCCTG AAGGCAGTGA CTGGGCAAAC CTTACCTTTG TAAATGGTGC CTGGCAGTAA
 
Protein sequence
MKIPGNIFKR EHGFTLIEIL VVVAILGVLA GVVIPNVVKF MHEGKVESAN TELANVRLAV 
LSAMVDAEIN TLNDGGTVGS GHTSNVSYGS PSVSLAVHNF VMGEVIGIYT LNEKGLIVSA
LMPEGSDWAN LTFVNGAWQ