Gene DET0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0011 
Symbol 
ID3229123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp12471 
End bp13643 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content52% 
IMG OID637119581 
ProductDNA polymerase IV, putative 
Protein accessionYP_180766 
Protein GI57233660 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCC GGCGAGTAAT GCACGTAGAC CTGGACGCCT TTTTTGTCTC AGTGGAACAA 
TCACTCCGCC CCGAACTGAA AAGTAAGCCG GTTATCGTAG GGGGCAAACC GGAACGGAGG
GGCGTGGTGG CTGCCGCCTC GTACGAAGCC CGCAAATTTG GTATTCACTC TGGTATGCCA
CTGCTTAGCG CCAAACACCT CTGCCCTCAG GCTGTATTTA TTGAAGGCAA CCACCGCCTT
TACCGTGAAT ATTCCGAAAA ATTTATGCAG ATACTCTCAG ACTTCTCACC CTTTCTTGAG
CCCATGGGGC TGGATGAAGC CTATCTGGAA GTAACCGGTT TTGAATCCCT GCACGGCAGT
ATAGGCGAAA TGGCCTTAAA AATCCGCCGC CGCATCACCG CCGAACTGAG CATAAACGCC
AGTATCGGCA TTGCCAATTC CAAAGTAGTA GCCAAGATAG CCACCGAACG TGCCAAACCC
AATGGCCAGT GTGAAGTGCC AGCTGGTGAG GAAGCCGCCT TTTTAGCCCC TTTGGATATA
TCCATAATGC CGGGCATAGG CAAAAAGACC GAATATCACC TGAAATCACT GGGCATAAAT
ACTCTGGGCA GGCTGGCCGG CATACCCGCC ACCTTTCTGA AAATCCATCT GGGAACATAT
GCCCCGTACC TTCTGAATGC GGCTGCCGGA ATAGATAACC GCCCGGTAGA AATGCCGGCC
GAGGCCAAAT CTATCAGCCG CGAAACCACC TTTGAGACCG ATACCCGAAA CCATACTTTT
CTGGAAGCAA AGCTGGGTTA TCTGTCTGAA AAGATTGCCG CCACCCTGCG CAAACGTGGC
AAACAGGCCC GGGTAGTTCA GATAAAAATA CGCTTTGCGG ACTTTACCAC CCTGACCCGC
CAGAAGCACC TTAACCACCC CTGCTCCGGT AATCAGGAAA TATTCCAAAC CGCCCTCAAA
CTGATGAACG GCATACTGGA TTCAGACCGC CGCTCAGTCA GGCTGCTGGG GGTGGGCATA
AGTGATTTCT GCGGCCCGGA AAAACAGCTG GAAATAGACC CGGCCAGAGC CCGGCTGGAA
AAACTGGACG CCTCTCTGGA TAAAATCCGC CAGAAATACG GTTTTGGTTC AGTCCAAACC
GGGCGGACTT ACAAGCTGAA AGATTTGTTT TAG
 
Protein sequence
MAIRRVMHVD LDAFFVSVEQ SLRPELKSKP VIVGGKPERR GVVAAASYEA RKFGIHSGMP 
LLSAKHLCPQ AVFIEGNHRL YREYSEKFMQ ILSDFSPFLE PMGLDEAYLE VTGFESLHGS
IGEMALKIRR RITAELSINA SIGIANSKVV AKIATERAKP NGQCEVPAGE EAAFLAPLDI
SIMPGIGKKT EYHLKSLGIN TLGRLAGIPA TFLKIHLGTY APYLLNAAAG IDNRPVEMPA
EAKSISRETT FETDTRNHTF LEAKLGYLSE KIAATLRKRG KQARVVQIKI RFADFTTLTR
QKHLNHPCSG NQEIFQTALK LMNGILDSDR RSVRLLGVGI SDFCGPEKQL EIDPARARLE
KLDASLDKIR QKYGFGSVQT GRTYKLKDLF