Gene DET0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0007 
Symbol 
ID3229136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp9581 
End bp10744 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content52% 
IMG OID637119577 
Producthypothetical protein 
Protein accessionYP_180762 
Protein GI57233673 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.870936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGA ATATACTAAT TATTGGCGGT TACGGCAATG CCGGCAGCTG TATAGCTATG 
CTCCTCCTTC AGGAGACAGA TGCCCGCATA TTTCTGGGCG GCAGGAATCT GGAGAAAGCC
AGGTATGTAG CCGAAGGGCT GAACCAGCTG GAAAACATCC AGCGGGTAGA GGGGGTAAAA
CTAAATGTGG AAGACCCCCA GAGCCTGAAA GAGGCTTTCT GCGGTATGGA CATAGTGGTG
GTGGCTTCCA ATACGCCCGA ATATGCCCGC CAGATTGCCT TTGCCGCTTT GGAAGCTAAA
GTGGATTATA TTGATATCCA GTATTCAGAC CGCAAGCTTC ACCAGCTGAA GCTGCTTTCC
CAGAAGATAA ATAATGCTAA TTTGTGCTTT ATTACCGAGG CCGGCTCGCT GCCGGGACTG
CCTTCGGCCC TGGTGCATTT TTGCCATCAA GGGTTTACCA CTCTGGAAAG GGTTTCGGTG
GGGGCTATTA TCTGCCAGAA CTGGAAATCA GCCATATCCG AAGAGCGCAC CAACGAAGTA
ATGCGCCAGC TTTCGGATTA CCAGCCCTAT ATTTACCGGG ATTATCACTG GAAGCGTTTG
GGCTGGTTTC GCCCCGGCAC TTCACGCACC TTTAATTTCG GGCCTTTCGG CCGTTTTTCC
TGCGGCCCTA TGACCCTTGA AGAAATGCGC CCGCTGCCCG GCATGTACCC CACCCTCAAA
GAGCTGGGTT TTTATCTGGG CGGGTTTAAC TGGTTTACCA ACTGGATAAG CATACCCCTT
TTGAACCTTG GGCTTCGCTT TTTGGGCAAA GAGGCTAAAC GCTCTTTGGG CAGACTGCTG
GTCTGGGGGC TGCGCAATTT TGACAGCCAG CCTTATGGTA TGGCCATCAA GGTTTCCGCC
AGAGGCGAAA GGGGCGGGAT AAGGGAGCGG CAGGAAATGC TGCTTTCCCA TAAAGATTCA
TATATGTTTA CGGCTATACC CCTGGTAGCC TGCTTGAAAC AGTATATAGA CGGTTCAGCC
CGGCGTTCCG GCCTGCATTA TATGGGGCAT CTGGTAGATT CCAGGCGGCT GGTGGCGGAT
ATGGAAAAAA TGGGTATGAC TATCCGTTTT CAAACCCATC TGATAGACAA GCCCCCGGCA
GAACGCCCCC GGATAGAAAA CTAA
 
Protein sequence
MTKNILIIGG YGNAGSCIAM LLLQETDARI FLGGRNLEKA RYVAEGLNQL ENIQRVEGVK 
LNVEDPQSLK EAFCGMDIVV VASNTPEYAR QIAFAALEAK VDYIDIQYSD RKLHQLKLLS
QKINNANLCF ITEAGSLPGL PSALVHFCHQ GFTTLERVSV GAIICQNWKS AISEERTNEV
MRQLSDYQPY IYRDYHWKRL GWFRPGTSRT FNFGPFGRFS CGPMTLEEMR PLPGMYPTLK
ELGFYLGGFN WFTNWISIPL LNLGLRFLGK EAKRSLGRLL VWGLRNFDSQ PYGMAIKVSA
RGERGGIRER QEMLLSHKDS YMFTAIPLVA CLKQYIDGSA RRSGLHYMGH LVDSRRLVAD
MEKMGMTIRF QTHLIDKPPA ERPRIEN