Gene TC0872 details

Gene Information

• Locus tag: TC0872
• ID: 1246240
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 1010206
• End bp: 1010994
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637061685
• Product: virulence protein pGP6-D-related protein
• Protein accession: NP_297245
• Protein GI: 15835486

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00520201
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAACA TCAAAACCCT TCTAGAAAAT CGCTTTAAAA AACCCACCTC CGATAAAATG 
GAGTCTCTCG CTAAAAAGCG ATTGGAGGGA GAGCTTTCTC CTTTTCTAAA TGGGTTTACG 
AATCCTAAGC TCTCTTCGCA AGAAGAAGCC AAATTTCGTC AATTACTCGA AGAGTATTCC 
TTTTCTAACG AAATCTCTAA ACACGATCTA CAACAACTTT GTCATTTATC TGCTCAAGTA 
AAACAGATCC ATCATCAAGC AGTACTTCTC CATGGCGAAC GAATCAAAAA AGTTCGAGAA 
TTATTAACAT CTTATCGGGA AGGAGCGTTC TCTGCATGGC TGTTGCTTAC CTATGGCAAT 
CGACAAACTC CTTATAATTT CTTAGTATAT TACGAACTCT TCTCCACTCT CCCGGATTCT 
TTGAAGCTCG AACTAGAAAA ATTACCCAGA CAAGCTGTCT ATACACTAGC TGCTCGAGAA 
GGAACTCAAG AGAAGAAAGA GGCGATCATC CGTAATTATC AAGGAGAAAC TAAAGGTGAA 
CTTCTTGAAA TTATCCGCAA AGAATTCCCT CTACTCCCTA CAGATCGACG CCACACCCCA 
CTTTCCCAAA AGGCTTTTAC TCTTCTTGCT AAAGGCACGA AATTACTGCG ACAATGCACC 
GACGTTTCTC ACGAAGAACT CATTGCCTTG GAGAAATTGA TTAAAAAGTT ACAAAAAGTT 
ACAACTAACC TTCTTTCTAA CACTAAGGTG TCCCGAAATG ACAACGAAAT CCAAAACTCT 
AGAAATTGA 

 

Protein sequence

MGNIKTLLEN RFKKPTSDKM ESLAKKRLEG ELSPFLNGFT NPKLSSQEEA KFRQLLEEYS 
FSNEISKHDL QQLCHLSAQV KQIHHQAVLL HGERIKKVRE LLTSYREGAF SAWLLLTYGN 
RQTPYNFLVY YELFSTLPDS LKLELEKLPR QAVYTLAARE GTQEKKEAII RNYQGETKGE 
LLEIIRKEFP LLPTDRRHTP LSQKAFTLLA KGTKLLRQCT DVSHEELIAL EKLIKKLQKV 
TTNLLSNTKV SRNDNEIQNS RN