Gene TC0815 details

Gene Information

• Locus tag: TC0815
• Symbol: rplC
• ID: 1246182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 948000
• End bp: 948665
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637061627
• Product: 50S ribosomal protein L3
• Protein accession: NP_297188
• Protein GI: 15835429
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000249143
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGTCTC AGCTTAGCCT AATAGGGAAA AAGGAAGGCA TGATGCATGT CTTCGATAAG 
AATGGAAATC TTGTTGCGTG TTCGGTAATT AGCATAGAGC CAAACGTTGT TGCCCAGCTG 
AAAACCGCAT CTTCAGATGG CTATAATGCT GTTCAAATGG GGGCAGATGC CGTAAAAGCT 
CCTGAAAAAA CCATTGAAAA GCGTTTCTCT AAAGCACTAC TCGGGCATTT TAAAAAGTCT 
GGGGGATGTG CTTTTCGTGT TTTAAAAGAG GTTGTCGTTT CTGAAGAGGC TGTTCAGTCG 
GTTTCTTTGG GCGATGAATT TGGGGTGGAA ATTTTCGACG GAGTATCCAA CGTTGATGTT 
TGCGGAATTT CTAAAGGTAA AGGTTTCCAA GGGGTGATGA AGAAGTTTGG ATTCCGAGGG 
GGGCCAAAAA GCCACGGTTC TGGATTCCAT CGTCATGCAG GATCTATTGG AATGAGATCT 
ACTCCTGGGC GATGTTTCCC TGGAAGTAAA CGTCCAAGCC ATATGGGATG TGATCGGGTT 
ACAGTCAAGA ATTTAGAAGT TGTAAAAGTT GACTTGGATA GAAAAGTTAT GCTCGTTAAG 
GGTGCAATTC CAGGTTTTAA AGGATCCGTT GTTGTTGTGA AGCGTTCTTG CGGAGTAGAA 
GGGTAG 

 

Protein sequence

MRSQLSLIGK KEGMMHVFDK NGNLVACSVI SIEPNVVAQL KTASSDGYNA VQMGADAVKA 
PEKTIEKRFS KALLGHFKKS GGCAFRVLKE VVVSEEAVQS VSLGDEFGVE IFDGVSNVDV 
CGISKGKGFQ GVMKKFGFRG GPKSHGSGFH RHAGSIGMRS TPGRCFPGSK RPSHMGCDRV 
TVKNLEVVKV DLDRKVMLVK GAIPGFKGSV VVVKRSCGVE G