Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0803 |
Symbol | rplE |
ID | 1246170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 942593 |
End bp | 943135 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637061615 |
Product | 50S ribosomal protein L5 |
Protein accession | NP_297176 |
Protein GI | 15835417 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000201599 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGGT TAAAAAAACT ATATACTGAA GAGATCAGAA AAACTCTTCA AGATAAGTTT CAATATGAAA ATGTTATGCA GATTCCTGTT CTTAAGAAAA TAGTCATAAG TATGGGTCTT GCAGAGGCTG CAAAAGATAA AAATCTTTTT CAGTCCCATT TAGAAGAGTT GGCTGTTATC TCTGGACAAA AACCTTTAGT AACTAGAGCC AAAAATTCTA TCGCAGGGTT TAAGTTGCGA GAAGGACAGG GGATCGGGGC TAAAGTCACT TTACGAGGGA TTCGTATGTA TGACTTTATG GACCGTTTTT GCAATATTGT CTCCCCAAGA ATTCGAGACT TTAGAGGATT CTCTTGTAAA GGGGATGGTC GAGGTTGTTA TTCCCTAGGT TTAGATGATC AGCAAATCTT CCCTGAAGTT GATTTGGATC GTGTTAAACG ATCTCAGGGG ATGAATATTA CTTGGGTAAC TACAGCACAA ACCGATGCGG AGTGCCTTAC CTTGTTAGAG TGTATGGGCT TGCGTTTCAA GAAGGCTCAA TAA
|
Protein sequence | MSRLKKLYTE EIRKTLQDKF QYENVMQIPV LKKIVISMGL AEAAKDKNLF QSHLEELAVI SGQKPLVTRA KNSIAGFKLR EGQGIGAKVT LRGIRMYDFM DRFCNIVSPR IRDFRGFSCK GDGRGCYSLG LDDQQIFPEV DLDRVKRSQG MNITWVTTAQ TDAECLTLLE CMGLRFKKAQ
|
| |