Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0714 |
Symbol | dapF |
ID | 1246077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | - |
Start bp | 852241 |
End bp | 853050 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637061523 |
Product | diaminopimelate epimerase |
Protein accession | NP_297088 |
Protein GI | 15835329 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGATCCT TTTCTCCTTT AATGACTTAT AGGTATCATC TATATTCTGG AACTGGTAAT AGTTTTATTT TAGGGGAGTT CATACCTCCC CTCCAACATA TTGTGTTTCT ATGCCAGAAA GAGAAGGTCG ATGGATTTTT ATGTGTAGAA CCTTCTGAGA TAGCAGATGC TAAGCTAACG ATTTTTAATA GCGATGGATC TGAAGCTTCT ATGTGTGGCA ATGGATTGCG GTGCGTAATG GCTCATGTAG CTCAGAGTTT GGGCTTAGAG GATGTTTCCA TTGAAACCGT TCGCGGGGTC TATCAAGGTA AGTTTTTTTC TATGGATCGA GTATTAGTTG ATATGACATT ACTTGATTGG AAGAAGACTA AGAAAACATT AACACATGTA TTGCCTGGCA TGCCGGAAGA GGTATTCTTT ATTGATACGG GAGTCCCGCA TGTTGTTGTC TTTGTTCCTG ATGTGAATAA GGTTCCTGTA CAAGAATGGG GGGCTTTCCT TCGTTATCAT GAAGATTTTA GGCCTAATGG AGTCAATGTA GACTTTGTTC AGACAAAGAA AGAAGACACG CTACTTGTTT ATACTTATGA GCGGGGATGC GAGCGAGAAA CTCTTTCTTG TGGGACAGGA ATGTTAGCGA GTGCTTTAGT TGCTGCAGAT GTTTTTTCGT TAGAACAAGA TTTTTCTCTG TTAGTATGTT CTCGGAGTGG AAACATTGTT AAGATTTTTT CTGAAAACGG TAAGGTTTTT TTAGAAGGGC CTGTAACCCT TTTGAATTGT AGTGAAAATA TTGGGGAGTT TGCCCCCTAA
|
Protein sequence | MGSFSPLMTY RYHLYSGTGN SFILGEFIPP LQHIVFLCQK EKVDGFLCVE PSEIADAKLT IFNSDGSEAS MCGNGLRCVM AHVAQSLGLE DVSIETVRGV YQGKFFSMDR VLVDMTLLDW KKTKKTLTHV LPGMPEEVFF IDTGVPHVVV FVPDVNKVPV QEWGAFLRYH EDFRPNGVNV DFVQTKKEDT LLVYTYERGC ERETLSCGTG MLASALVAAD VFSLEQDFSL LVCSRSGNIV KIFSENGKVF LEGPVTLLNC SENIGEFAP
|
| |