Gene TC0632 details

Gene Information

• Locus tag: TC0632
• Symbol: def
• ID: 1245992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 757895
• End bp: 758440
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637061438
• Product: peptide deformylase
• Protein accession: NP_297006
• Protein GI: 15835247
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAGAG ATCTTGAGTA TTATGATAGC CCGATTTTGC GTAAAGTTGC GGCTCCTATA 
GATGAAATCA CGGATGAGCT ACGACAACTT GTACTAGATA TGAGTGAGAC TATGACTTTT 
TATAAAGGAG TGGGACTCGC AGCTCCTCAG GTAGGACATA GTGTTGCTTT ATTCATTATG 
GGCGTAGAAA AAGAGCTGGA CGATGGAGAG CTCATTTTCT GTGATTTCCC AAAAGTATTC 
ATTAATCCTG TGATTACTCA AAAATCTGAG CAGTTAGTTT ATGGAAATGA AGGGTGTTTG 
TCTATTCCAG GATTGAGAGG AGAAGTGGCT AGGCCCGATA AAATTACGGT AACAGCAAAA 
AATTTGGATG GCCAACCATT TTCTATGACT CTAGAGGGTT TTTTGGCGAG AATCGTCATG 
CATGAAACCG ATCACCTGCA TGGAGTCCTC TATATCGATA GAATGTCTGA TAAAGACAAG 
ACGAAACAGT TTAAGAATAA CCTAGAGAAA ATTCGCCGAA AATATAGTAT TTTGCGAGGC 
TTATAG 

 

Protein sequence

MIRDLEYYDS PILRKVAAPI DEITDELRQL VLDMSETMTF YKGVGLAAPQ VGHSVALFIM 
GVEKELDDGE LIFCDFPKVF INPVITQKSE QLVYGNEGCL SIPGLRGEVA RPDKITVTAK 
NLDGQPFSMT LEGFLARIVM HETDHLHGVL YIDRMSDKDK TKQFKNNLEK IRRKYSILRG 
L